RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TCTE3Q8IZS6 198 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 OR2V2Q96R30 315 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 IFT22Q9H7X7 185 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 HES4Q9HCC6 221 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 NECAP2Q9NVZ3 263 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 OR14J1Q9UGF5 321 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 NAPSAO96009 420 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 GLRA1P23415 457 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 UBE2MP61081 183 aaKnown RBP15.33■□□□□ 0.04
SMC4-211ENST00000469858 ZNF146Q15072 292 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 CDSNQ15517 529 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 GRK1Q15835 563 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 SPIN3Q5JUX0 258 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 LHFPL1Q86WI0 220 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 MUC20Q8N307 709 aaPredicted RBP15.33■□□□□ 0.04
SMC4-211ENST00000469858 DRAXINQ8NBI3 349 aaPredicted RBP15.33■□□□□ 0.04
SMC4-211ENST00000469858 LILRB4Q8NHJ6 448 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 CA5BP1Q8WTZ4 195 aa15.33■□□□□ 0.04
SMC4-211ENST00000469858 ADGRG4Q8IZF6 3080 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 SH2D1BO14796 132 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 OR5H8P0DN80 308 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 CEBPDP49716 269 aaPredicted RBP15.32■□□□□ 0.04
SMC4-211ENST00000469858 ZNF81P51508 661 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 BAMBIQ13145 260 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 RBM39Q14498 530 aaKnown RBP15.32■□□□□ 0.04
SMC4-211ENST00000469858 PAN3Q58A45 887 aaKnown RBP15.32■□□□□ 0.04
SMC4-211ENST00000469858 SPRNQ5BIV9 151 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 AADACL3Q5VUY0 350 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 MEGF10Q96KG7 1140 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 ESRP2Q9H6T0 727 aaKnown RBP15.32■□□□□ 0.04
SMC4-211ENST00000469858 MYOZ1Q9NP98 299 aaPredicted RBP15.32■□□□□ 0.04
SMC4-211ENST00000469858 RELNP78509 3460 aa15.32■□□□□ 0.04
SMC4-211ENST00000469858 SLC33A1O00400 549 aaPredicted RBP15.31■□□□□ 0.04
SMC4-211ENST00000469858 ANXA3P12429 323 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ACP7Q6ZNF0 438 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 SLC25A42Q86VD7 318 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 UXS1Q8NBZ7 420 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ADAD2Q8NCV1 583 aaKnown RBP15.31■□□□□ 0.04
SMC4-211ENST00000469858 LINC01560Q8TB33 94 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ZNF431Q8TF32 576 aaPredicted RBP15.31■□□□□ 0.04
SMC4-211ENST00000469858 LRRC29Q8WV35 223 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ZNF2Q9BSG1 426 aaPredicted RBP15.31■□□□□ 0.04
SMC4-211ENST00000469858 MGAT4CQ9UBM8 478 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 OR5H14A6NHG9 310 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 SMLR1H3BR10 107 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ZNF205O95201 554 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 HAND1O96004 215 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 GLAP06280 429 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 OR4A8P0C604 315 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 GSTT2P0CG29 244 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ADIPOQQ15848 244 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ITLN1Q8WWA0 313 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 PLPPR2Q96GM1 343 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 Q9N2K0 584 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 NDRG3Q9UGV2 375 aa15.31■□□□□ 0.04
SMC4-211ENST00000469858 ERRFI1Q9UJM3 462 aaPredicted RBP15.31■□□□□ 0.04
SMC4-211ENST00000469858 PTBP3O95758 552 aaKnown RBP15.3■□□□□ 0.04
SMC4-211ENST00000469858 HLA-AP01891 365 aaKnown RBP15.3■□□□□ 0.04
SMC4-211ENST00000469858 AKR1C4P17516 323 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 PI3P19957 117 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 FPR2P25090 351 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 DHRS2Q13268 280 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 NCMAPQ5T1S8 102 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 PRR7Q8TB68 274 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 TMPRSS13Q9BYE2 586 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 GPR132Q9UNW8 380 aa15.3■□□□□ 0.04
SMC4-211ENST00000469858 CEACAM18A8MTB9 384 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 IGHV1-46P01743 117 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 PPP1R1AQ13522 171 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 SMIM21Q3B7S5 101 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 MOGAT3Q86VF5 341 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 MRPL30Q8TCC3 161 aaKnown RBP15.29■□□□□ 0.04
SMC4-211ENST00000469858 LRRC46Q96FV0 321 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 SCGB3A2Q96PL1 93 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 RIMS4Q9H426 269 aaPredicted RBP15.29■□□□□ 0.04
SMC4-211ENST00000469858 C5orf66Q9H5L9 145 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 GLS2Q9UI32 602 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 CACNA1DQ01668 2161 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 MEIKINA0A087WXM9 373 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 TNFAIP6P98066 277 aaPredicted RBP15.29■□□□□ 0.04
SMC4-211ENST00000469858 IGSF11Q5DX21 431 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 ZNF660Q6AZW8 331 aaPredicted RBP15.29■□□□□ 0.04
SMC4-211ENST00000469858 C20orf204Q6ZNR8 217 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 C5orf24Q7Z6I8 188 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 PEG10Q86TG7 708 aaKnown RBP15.29■□□□□ 0.04
SMC4-211ENST00000469858 NOXA1Q86UR1 476 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 ZNF436Q9C0F3 470 aaPredicted RBP15.29■□□□□ 0.04
SMC4-211ENST00000469858 LIME1Q9H400 295 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 TMEM165Q9HC07 324 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 KCNJ16Q9NPI9 418 aa15.29■□□□□ 0.04
SMC4-211ENST00000469858 ACACBO00763 2458 aa15.28■□□□□ 0.04
SMC4-211ENST00000469858 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.28■□□□□ 0.04
SMC4-211ENST00000469858 SHISA9B4DS77 424 aa15.28■□□□□ 0.04
SMC4-211ENST00000469858 PGAM2P15259 253 aa15.28■□□□□ 0.04
SMC4-211ENST00000469858 EGR1P18146 543 aa15.28■□□□□ 0.04
SMC4-211ENST00000469858 VAMP1P23763 118 aa15.28■□□□□ 0.04
SMC4-211ENST00000469858 MDH2P40926 338 aaKnown RBP15.28■□□□□ 0.04
SMC4-211ENST00000469858 ATXN7L3Q14CW9 347 aaPredicted RBP15.28■□□□□ 0.04
SMC4-211ENST00000469858 SRSF7Q16629 238 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMC4-211ENST00000469858 Q6ZS49 121 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms