RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 DTYMKP23919 212 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 COL8A2P25067 703 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 PRDX2P32119 198 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 PRSS3P35030 304 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 DGCR2P98153 550 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 HOXA4Q00056 320 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-204ENST00000469232 BAK1Q16611 211 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 CR1LQ2VPA4 569 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 C6orf201Q7Z4U5 140 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 IZUMO1Q8IYV9 350 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 SUMF2Q8NBJ7 301 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 OR52I2Q8NH67 350 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 CYYR1Q96J86 154 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 VRK1Q99986 396 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-204ENST00000469232 CHST6Q9GZX3 395 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 FAM234AQ9H0X4 552 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 RIMS4Q9H426 269 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-204ENST00000469232 CHODLQ9H9P2 273 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 GLS2Q9UI32 602 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 MAB21L2Q9Y586 359 aa6.81□□□□□ -1.32
NPHP3-204ENST00000469232 PPIAL4EA0A075B759 164 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 MEIOCA2RUB1 952 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 ISPDA4D126 451 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 TMEM235A6NFC5 223 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 RFPL4AA6NLU0 287 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 PPIAL4DF5H284 164 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 RFPL4AL1F8VTS6 287 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 J3QRK9 145 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 K7N7A8 449 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 DEGS1O15121 323 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 SIGLEC5O15389 551 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 LANCL1O43813 399 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 PSPNO60542 156 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 OR7C1O76099 320 aaPredicted RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 PPIAL4FP0DN26 164 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 IL7P13232 177 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 IRF2P14316 349 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 DAOP14920 347 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 GNB3P16520 340 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 GABRR1P24046 479 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 ERP29P30040 261 aaKnown RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 CD80P33681 288 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 MDH2P40926 338 aaKnown RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 CBX5P45973 191 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 OR3A1P47881 315 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 IKZF1Q13422 519 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 DCTN2Q13561 401 aaKnown RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 IL18Q14116 193 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 MICBQ29980 383 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 HFEQ30201 348 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 TMEM155Q4W5P6 130 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 FAM201AQ5SY85 155 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 OLFML2AQ68BL7 652 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 ZNF497Q6ZNH5 498 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 Q6ZPA2 131 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 Q8N402 240 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 PHF21AQ96BD5 680 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 MBD6Q96DN6 1003 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 SNX22Q96L94 193 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 GAFA1Q96PS6 74 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 NEDD4LQ96PU5 975 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 DPCDQ9BVM2 203 aaPredicted RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 CXorf56Q9H5V9 222 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 MBNL3Q9NUK0 354 aaKnown RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 UNC79Q9P2D8 2635 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 ELF5Q9UKW6 265 aaPredicted RBP6.8□□□□□ -1.32
NPHP3-204ENST00000469232 PPIAL4AQ9Y536 164 aa6.8□□□□□ -1.32
NPHP3-204ENST00000469232 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ANKRD20A5PA0PJZ0 165 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 F5H0A9 414 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ORC5O43913 435 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 NDUFS7O75251 213 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 FCN3O75636 299 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 IGHV4-39P01824 125 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 CD74P04233 296 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 CGB3P0DN86 165 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 CGB7P0DN87 165 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 PTHLHP12272 177 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 DUSP1P28562 367 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 BTG1P62324 171 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 DYRK1AQ13627 763 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 KLF9Q13886 244 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 RBM39Q14498 530 aaKnown RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ZMYND11Q15326 602 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 KCNJ8Q15842 424 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 PYDC2Q56P42 97 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 RSBN1Q5VWQ0 802 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 SLC35E4Q6ICL7 350 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 DCDC5Q6ZRR9 648 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ZNF554Q86TJ5 538 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ZNF561Q8N587 486 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 DTX3Q8N9I9 347 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 CCL17Q92583 94 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 THAP7Q9BT49 309 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 FAAP24Q9BTP7 215 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 KRTAP4-6Q9BYQ5 205 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 LINC00574Q9H8X3 128 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 BARX1Q9HBU1 254 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 PLEKHJ1Q9NW61 149 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 AK3Q9UIJ7 227 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms