RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 IFT22Q9H7X7 185 aa9.85□□□□□ -0.83
VPS13D-204ENST00000469054 C19orf12Q9NSK7 152 aa9.85□□□□□ -0.83
VPS13D-204ENST00000469054 KPTNQ9Y664 436 aa9.85□□□□□ -0.83
VPS13D-204ENST00000469054 ARHGAP32A7KAX9 2087 aa9.85□□□□□ -0.83
VPS13D-204ENST00000469054 IFITM5A6NNB3 132 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 AIREO43918 545 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 TOX4O94842 621 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 BPNT1O95861 308 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 CSN2P05814 226 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 FAM157CP0CG43 387 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 MMP9P14780 707 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 ARSBP15848 533 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 SRD5A1P18405 259 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 ERP29P30040 261 aaKnown RBP9.84□□□□□ -0.83
VPS13D-204ENST00000469054 QRFPP83859 136 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 EDDM3AQ14507 147 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 RAB11BQ15907 218 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 METTL11BQ5VVY1 283 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 OR10K2Q6IF99 312 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 TPRA1Q86W33 373 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 CMTM4Q8IZR5 234 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 KIR3DL3Q8N743 410 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 OR13F1Q8NGS4 319 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 KCNG3Q8TAE7 436 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 FAM46BQ96A09 425 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 WDFY2Q96P53 400 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 CENPOQ9BU64 300 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 SELENOIQ9C0D9 397 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 SIRPDQ9H106 197 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 PPA2Q9H2U2 334 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 RNF167Q9H6Y7 350 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 PLA2G2EQ9NZK7 142 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 ONECUT1Q9UBC0 465 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 STEAP1Q9UHE8 339 aa9.84□□□□□ -0.83
VPS13D-204ENST00000469054 SONP18583 2426 aaKnown RBP9.84□□□□□ -0.83
VPS13D-204ENST00000469054 A0A1W2PPH5 198 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 hADV38S2A0JD32 116 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FUOMA2VDF0 154 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A10PA6NDY2 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A18PA6NE21 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A16PA6NEW6 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A20PA6NIJ5 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A8PA6NJQ4 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A7PA6NKC0 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 NOTOA8MTQ0 251 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A22PA8MWA6 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A12PA8MX19 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A5PA8MXJ8 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A23PA8MXZ1 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 M0R1W7 72 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 HSPB6O14558 160 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 MPIG6BO95866 241 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FSHBP01225 129 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 TFAP2AP05549 437 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A15PP0C7V4 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A13PP0C7W8 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A14PP0C7W9 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM90A24PP0C7X0 464 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 CFPP27918 469 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 SDC2P34741 201 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 KCNJ3P48549 501 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 P2RX3P56373 397 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 CLDN12P56749 244 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 MEF2CQ06413 473 aaPredicted RBP9.83□□□□□ -0.84
VPS13D-204ENST00000469054 AESQ08117 197 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 BLMHQ13867 455 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 ZNF273Q14593 569 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 P2RY14Q15391 338 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 C2orf76Q3KRA6 126 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 PAN3Q58A45 887 aaKnown RBP9.83□□□□□ -0.84
VPS13D-204ENST00000469054 ATAD3CQ5T2N8 411 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 HES5Q5TA89 166 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 METAP1DQ6UB28 335 aaPredicted RBP9.83□□□□□ -0.84
VPS13D-204ENST00000469054 C1orf122Q6ZSJ8 110 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 BPIFB2Q8N4F0 458 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 TPRX1Q8N7U7 411 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 SUMF2Q8NBJ7 301 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 OR51D1Q8NGF3 324 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 FAM3DQ96BQ1 224 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 POM121Q96HA1 1249 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 Q96M66 194 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 TBX15Q96SF7 602 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 PCGF1Q9BSM1 259 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 DPCDQ9BVM2 203 aaPredicted RBP9.83□□□□□ -0.84
VPS13D-204ENST00000469054 TMEM59Q9BXS4 323 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 ZNF581Q9P0T4 197 aa9.83□□□□□ -0.84
VPS13D-204ENST00000469054 H3BUI4 141 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 AIPO00170 330 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
VPS13D-204ENST00000469054 ALDH3B2P48448 385 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 RPS27AP62979 156 aaKnown RBP9.82□□□□□ -0.84
VPS13D-204ENST00000469054 UNC119Q13432 240 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 KLF17Q5JT82 389 aaPredicted RBP9.82□□□□□ -0.84
VPS13D-204ENST00000469054 KRBOX4Q5JUW0 171 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 OR2W3Q7Z3T1 314 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 VMO1Q7Z5L0 202 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 NR2C2APQ86WQ0 139 aa9.82□□□□□ -0.84
VPS13D-204ENST00000469054 Q8N7P7 452 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms