RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 AMY2AP04746 511 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 ISG15P05161 165 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 LMO1P25800 156 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 CD34P28906 385 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 PRRX1P54821 245 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 RBM39Q14498 530 aaKnown RBP13.75□□□□□ -0.21
TRIM56-203ENST00000467847 HLA-DRB5Q30154 266 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 C9orf152Q5JTZ5 239 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 KRBOX4Q5JUW0 171 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 OR5D18Q8NGL1 313 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 SPACA5Q96QH8 159 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 MBOAT4Q96T53 435 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 COMMD4Q9H0A8 199 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 ING3Q9NXR8 418 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 HHLA2Q9UM44 414 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 TENM3Q9P273 2699 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 M0QZK8 103 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
TRIM56-203ENST00000467847 CSN2P05814 226 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 FCGR1AP12314 374 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 MNDAP41218 407 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 OR3A4PP47883 348 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 NANOS3P60323 173 aaKnown RBP13.74□□□□□ -0.21
TRIM56-203ENST00000467847 DEFB121Q5J5C9 76 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 CCDC144NLQ6NUI1 221 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 KCTD20Q7Z5Y7 419 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 OR13C3Q8NGS6 347 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 OR13C9Q8NGT0 318 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 RHOFQ9HBH0 211 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 INPP5EQ9NRR6 644 aa13.74□□□□□ -0.21
TRIM56-203ENST00000467847 DAPL1A0PJW8 107 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 LY6LH3BQJ8 138 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 SLC33A1O00400 549 aaPredicted RBP13.73□□□□□ -0.21
TRIM56-203ENST00000467847 SLC16A6O15403 523 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 MT-ND2P03891 347 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 HTR1AP08908 422 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 FAM106CPP0CH98 169 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 KRTAP10-11P60412 298 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 ATXN7L3Q14CW9 347 aaPredicted RBP13.73□□□□□ -0.21
TRIM56-203ENST00000467847 FDX2Q6P4F2 183 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 SAXO1Q8IYX7 474 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 OSR2Q8N2R0 312 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 OR51A4Q8NGJ6 313 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 OR10AC1Q8NH08 325 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 COQ2Q96H96 371 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 IMPAD1Q9NX62 359 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 OAZ3Q9UMX2 235 aa13.73□□□□□ -0.21
TRIM56-203ENST00000467847 A0A087X0M5 115 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 A0A1B0GX30 115 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 WI2-2373I1.2A0A1W2PRP0 233 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 ZNF729A6NN14 1252 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-203ENST00000467847 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 DEGS1O15121 323 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 NFYBP25208 207 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 BNIP1Q12981 228 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 UTF1Q5T230 341 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 C1orf146Q5VVC0 180 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 Q6P435 159 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 RNFT2Q96EX2 444 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 PPIL3Q9H2H8 161 aaKnown RBP13.72□□□□□ -0.21
TRIM56-203ENST00000467847 OR6C3Q9NZP0 311 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 MOB4Q9Y3A3 225 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 HSPE1-MOB4S4R3N1 261 aa13.72□□□□□ -0.21
TRIM56-203ENST00000467847 KBTBD11-OT1A0A1B0GTJ5 212 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 PSMB11A5LHX3 300 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 J3QRE1 110 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 TMEM225BP0DP42 221 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 HOXD3P31249 432 aaPredicted RBP13.71□□□□□ -0.21
TRIM56-203ENST00000467847 CCR9P51686 369 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 C17orf58Q2M2W7 97 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 OR9G1Q8NH87 305 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
TRIM56-203ENST00000467847 TOMM40LQ969M1 308 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 RPEQ96AT9 228 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 CENPNQ96H22 339 aaPredicted RBP13.71□□□□□ -0.21
TRIM56-203ENST00000467847 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 ZNF649Q9BS31 505 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 ZCCHC4Q9H5U6 513 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 PCDHB16Q9NRJ7 776 aa13.71□□□□□ -0.21
TRIM56-203ENST00000467847 AMMECR1Q9Y4X0 333 aaPredicted RBP13.71□□□□□ -0.21
TRIM56-203ENST00000467847 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 OR4C45A6NMZ5 311 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 J3QLW9 94 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 HSPB6O14558 160 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 HCKP08631 526 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 ZNF19P17023 458 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 GLP1RP43220 463 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 EGFEM1PQ0D2K5 195 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 CDK5R1Q15078 307 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 C11orf87Q6NUJ2 197 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 OR51D1Q8NGF3 324 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 DPF1Q92782 380 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 PELI1Q96FA3 418 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 KIRREL1Q96J84 757 aa13.7□□□□□ -0.22
TRIM56-203ENST00000467847 C4orf36Q96KX1 117 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms