RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 GSTK1Q9Y2Q3 226 aa8.38□□□□□ -1.07
SSR3-205ENST00000467789 TET2Q6N021 2002 aaPredicted RBP8.37□□□□□ -1.07
SSR3-205ENST00000467789 IGHV2-26A0A0B4J1V2 119 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 IGKV1-12A0A0C4DH73 117 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 IGKV1D-12P01611 117 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 LIMS3P0CW19 117 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 LIMS4P0CW20 117 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 TMEM225BP0DP42 221 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 ZNF44P15621 663 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 RAB3AP20336 220 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 HTR1DP28221 377 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 DUSP1P28562 367 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 ARHGDIBP52566 201 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 ZP1P60852 638 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 DYNC1I2Q13409 638 aaKnown RBP8.37□□□□□ -1.07
SSR3-205ENST00000467789 MED21Q13503 144 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 FAM189A2Q15884 450 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 SSX2Q16385 188 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 TTC23Q5W5X9 447 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 ZNF529Q6P280 563 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 TRAPPC6BQ86SZ2 158 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 PACRGLQ8N7B6 248 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 SETD9Q8NE22 299 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 ZNF596Q8TC21 504 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 GPR148Q8TDV2 347 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 TSEN15Q8WW01 171 aaKnown RBP8.37□□□□□ -1.07
SSR3-205ENST00000467789 RFT1Q96AA3 541 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 PDCD1LG2Q9BQ51 273 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 NCOR1P1Q9H4R4 102 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 AASSQ9UDR5 926 aa8.37□□□□□ -1.07
SSR3-205ENST00000467789 NOTCH1P46531 2555 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 A0A0G2JK05 382 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 A6NDX4 124 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 SIRPB1O00241 398 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 WBP4O75554 376 aaKnown RBP8.36□□□□□ -1.07
SSR3-205ENST00000467789 BAG2O95816 211 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 ALDOBP05062 364 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 CD34P28906 385 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 CEACAM3P40198 252 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 KCNJ3P48549 501 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 BDH1Q02338 343 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 PAX5Q02548 391 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 ZNF691Q5VV52 312 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 C16orf82Q7Z2V1 217 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 DYNAPQ8N1N2 210 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 Q8N2B8 174 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 TPRX1Q8N7U7 411 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 Q8NFD4 153 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 OR51T1Q8NGJ9 327 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 OR5D18Q8NGL1 313 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 NDNFQ8TB73 568 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 APH1BQ8WW43 257 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 CFHR4Q92496 578 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 AKR1E2Q96JD6 320 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 SPACA5Q96QH8 159 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 PRSS22Q9GZN4 317 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 OR6C3Q9NZP0 311 aa8.36□□□□□ -1.07
SSR3-205ENST00000467789 DIMT1Q9UNQ2 313 aaKnown RBP8.36□□□□□ -1.07
SSR3-205ENST00000467789 EXOSC1Q9Y3B2 195 aaKnown RBP8.36□□□□□ -1.07
SSR3-205ENST00000467789 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 A0A087X0M5 115 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 A0A1B0GX30 115 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 ODAMA1E959 279 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 ZNF729A6NN14 1252 aaPredicted RBP8.35□□□□□ -1.07
SSR3-205ENST00000467789 E9PI62 339 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 F2RL2O00254 374 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 SLC33A1O00400 549 aaPredicted RBP8.35□□□□□ -1.07
SSR3-205ENST00000467789 DEGS1O15121 323 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 CHST1O43916 411 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 CSF1P09603 554 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 MYL12AP19105 171 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 CDK2P24941 298 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 BRS3P32247 399 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 PTGFRP43088 359 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 SNU13P55769 128 aaKnown RBP8.35□□□□□ -1.07
SSR3-205ENST00000467789 SCN1BQ07699 218 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 AESQ08117 197 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 IL13RA2Q14627 380 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 CDK5R1Q15078 307 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 KRBOX4Q5JUW0 171 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 Q6P435 159 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 ABHD12Q8N2K0 398 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 KLHDC1Q8N7A1 406 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 ZNF565Q8N9K5 539 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 OR4D6Q8NGJ1 314 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 TMEM106AQ96A25 262 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 GPER1Q99527 375 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 BARHL1Q9BZE3 327 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 TMEM138Q9NPI0 162 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 PCDHB16Q9NRJ7 776 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 PAK1IP1Q9NWT1 392 aaPredicted RBP8.35□□□□□ -1.07
SSR3-205ENST00000467789 CHCHD3Q9NX63 227 aaKnown RBP8.35□□□□□ -1.07
SSR3-205ENST00000467789 BABAM2Q9NXR7 383 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.35□□□□□ -1.07
SSR3-205ENST00000467789 DPM3Q9P2X0 92 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 HSPE1-MOB4S4R3N1 261 aa8.35□□□□□ -1.07
SSR3-205ENST00000467789 MEX3AA1L020 520 aaKnown RBP8.34□□□□□ -1.07
SSR3-205ENST00000467789 MEGF11A6BM72 1044 aa8.34□□□□□ -1.07
SSR3-205ENST00000467789 FAM90A22PA8MWA6 464 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms