RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 TMEM104Q8NE00 496 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 Q8NFD4 153 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 OR51T1Q8NGJ9 327 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 OR5D13Q8NGL4 314 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 PHYHIPQ92561 330 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 THRSPQ92748 146 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 FAM46BQ96A09 425 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 DUX5Q96PT3 197 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 SEBOXQ9HB31 216 aaPredicted RBP9.56□□□□□ -0.88
CUX1-207ENST00000465461 IL36GQ9NZH8 169 aa9.56□□□□□ -0.88
CUX1-207ENST00000465461 TRAV39A0A0B4J263 110 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 IGHV1-69DA0A0B4J2H0 117 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 SMIM30A4D0T7 59 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 MEGF11A6BM72 1044 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 MGST3O14880 152 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 TCF21O43680 179 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 CRTAPO75718 401 aaPredicted RBP9.55□□□□□ -0.88
CUX1-207ENST00000465461 OR7C1O76099 320 aaPredicted RBP9.55□□□□□ -0.88
CUX1-207ENST00000465461 IGHV1-69P01742 117 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 FPR2P25090 351 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 PSMA1P25786 263 aaKnown RBP9.55□□□□□ -0.88
CUX1-207ENST00000465461 BMXP51813 675 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 DLX6P56179 175 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 CLDN12P56749 244 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 RBM11P57052 281 aaKnown RBP9.55□□□□□ -0.88
CUX1-207ENST00000465461 OR10A3P58181 314 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 P2RY14Q15391 338 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 DEFB112Q30KQ8 113 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 PAN3Q58A45 887 aaKnown RBP9.55□□□□□ -0.88
CUX1-207ENST00000465461 ATAD3CQ5T2N8 411 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 GLT8D1Q68CQ7 371 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 HCP5Q6MZN7 132 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 CDH26Q8IXH8 852 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 KIR3DL3Q8N743 410 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 SUMF2Q8NBJ7 301 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 PLPPR1Q8TBJ4 325 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 TBC1D15Q8TC07 691 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 FCGR1BQ92637 280 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 COQ2Q96H96 371 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 MDFIQ99750 246 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 SELENOIQ9C0D9 397 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 SLITRK2Q9H156 845 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 OR51E2Q9H255 320 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 RNF167Q9H6Y7 350 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
CUX1-207ENST00000465461 JMJD1CQ15652 2540 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 TRDV1A0A1B0GX56 115 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 M0R1W7 72 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 MMP23AO75900 390 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 ARL6IP5O75915 188 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 GTF2F2P13984 249 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 MGMTP16455 207 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 COX7A1P24310 79 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 PAX6P26367 422 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 P2RX3P56373 397 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 BLMHQ13867 455 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 IL13RA2Q14627 380 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 KRBOX4Q5JUW0 171 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 C1orf100Q5SVJ3 147 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 SYT6Q5T7P8 510 aaPredicted RBP9.54□□□□□ -0.88
CUX1-207ENST00000465461 HES5Q5TA89 166 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 CD200R1LQ6Q8B3 271 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 BAIAP2L2Q6UXY1 529 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 TSPAN14Q8NG11 270 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 PPP1R35Q8TAP8 253 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 SLC25A28Q96A46 364 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 UQCC2Q9BRT2 126 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 DPCDQ9BVM2 203 aaPredicted RBP9.54□□□□□ -0.88
CUX1-207ENST00000465461 METTL8Q9H825 291 aaKnown RBP9.54□□□□□ -0.88
CUX1-207ENST00000465461 TNFRSF19Q9NS68 423 aa9.54□□□□□ -0.88
CUX1-207ENST00000465461 A0A0U1RQK1 487 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 hADV38S2A0JD32 116 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 C17orf98A8MV24 154 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 SLC22A1O15245 554 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 ZNF780AO75290 641 aaPredicted RBP9.53□□□□□ -0.88
CUX1-207ENST00000465461 TNFAIP8O95379 198 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 MPIG6BO95866 241 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 ZNF728P0DKX0 622 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 VSIG8P0DPA2 414 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 PRTN3P24158 256 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 GADD45AP24522 165 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 HTR2CP28335 458 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 ERP29P30040 261 aaKnown RBP9.53□□□□□ -0.88
CUX1-207ENST00000465461 GDNFP39905 211 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 GPR176Q14439 515 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 KRTAP24-1Q3LI83 254 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 C1orf122Q6ZSJ8 110 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 RTN4RL2Q86UN3 420 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 ZDHHC22Q8N966 263 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 CHST4Q8NCG5 386 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 ZNF418Q8TF45 676 aaPredicted RBP9.53□□□□□ -0.88
CUX1-207ENST00000465461 C17orf50Q8WW18 174 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 DYRK2Q92630 601 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 FOXRED1Q96CU9 486 aaPredicted RBP9.53□□□□□ -0.88
CUX1-207ENST00000465461 DMRTB1Q96MA1 342 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 PLGRKTQ9HBL7 147 aa9.53□□□□□ -0.88
CUX1-207ENST00000465461 TXNL4BQ9NX01 149 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms