RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 LGALS12Q96DT0 336 aa16.68■□□□□ 0.26
CSPG5-204ENST00000465441 RHOFQ9HBH0 211 aa16.68■□□□□ 0.26
CSPG5-204ENST00000465441 ZNF286AQ9HBT8 521 aa16.68■□□□□ 0.26
CSPG5-204ENST00000465441 NEK6Q9HC98 313 aa16.68■□□□□ 0.26
CSPG5-204ENST00000465441 PCDHGB5Q9Y5G0 923 aa16.68■□□□□ 0.26
CSPG5-204ENST00000465441 ODAMA1E959 279 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 DEGS1O15121 323 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 CD34P28906 385 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 KRBOX4Q5JUW0 171 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 WFDC9Q8NEX5 89 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 SGCDQ92629 289 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 COQ2Q96H96 371 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 ISG20L2Q9H9L3 353 aaKnown RBP16.67■□□□□ 0.26
CSPG5-204ENST00000465441 LIN7BQ9HAP6 207 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 MYRFQ9Y2G1 1151 aa16.67■□□□□ 0.26
CSPG5-204ENST00000465441 A0A1W2PRX2 142 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 SNTNA6NMZ2 147 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 SLC33A1O00400 549 aaPredicted RBP16.66■□□□□ 0.26
CSPG5-204ENST00000465441 TOR1AO14656 332 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 CSN2P05814 226 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 TMEM225BP0DP42 221 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 ALDH3A2P51648 485 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 GALEQ14376 348 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 CDK5R1Q15078 307 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 C17orf58Q2M2W7 97 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 UTF1Q5T230 341 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 MRAPQ8TCY5 172 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 SLC25A33Q9BSK2 321 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 ALG8Q9BVK2 526 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 NECAP2Q9NVZ3 263 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 NOTCH3Q9UM47 2321 aa16.66■□□□□ 0.26
CSPG5-204ENST00000465441 H3BNX3 289 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 LY6LH3BQJ8 138 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 BUB1B-PAK6H3BSN5 160 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 ALX3O95076 343 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 LPLP06858 475 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 GABRB1P18505 474 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 PTGFRP43088 359 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 PRRX1P54821 245 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 ZP1P60852 638 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 KISS1Q15726 138 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 HLA-DRB5Q30154 266 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 ABCA11PQ4W5N1 156 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 TCTEX1D4Q5JR98 221 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 SERPINA12Q8IW75 414 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 CHST4Q8NCG5 386 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 OR4D6Q8NGJ1 314 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 CAPSLQ8WWF8 208 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 PHF21AQ96BD5 680 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 AKR1E2Q96JD6 320 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 RBM14Q96PK6 669 aaKnown RBP16.65■□□□□ 0.26
CSPG5-204ENST00000465441 ZNF649Q9BS31 505 aa16.65■□□□□ 0.26
CSPG5-204ENST00000465441 DNAH3Q8TD57 4116 aa16.64■□□□□ 0.26
CSPG5-204ENST00000465441 A0A087X0M5 115 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 A0A1B0GX30 115 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 SH2D7A6NKC9 451 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-204ENST00000465441 ZNF729A6NN14 1252 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-204ENST00000465441 PIN1P1O15428 100 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 OR2F2O95006 317 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 AMY1AP04745 511 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 AMY2AP04746 511 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 HCKP08631 526 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 CGB3P0DN86 165 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 CGB7P0DN87 165 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 LOXL3P58215 753 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 ATXN7L3Q14CW9 347 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-204ENST00000465441 TPTE2P1Q5T6R2 138 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 PARP16Q8N5Y8 322 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 OR5D14Q8NGL3 314 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 CREB3L1Q96BA8 519 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 MRPL48Q96GC5 212 aaKnown RBP16.64■□□□□ 0.25
CSPG5-204ENST00000465441 PPIL3Q9H2H8 161 aaKnown RBP16.64■□□□□ 0.25
CSPG5-204ENST00000465441 AMBNQ9NP70 447 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 AURKAIP1Q9NWT8 199 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-204ENST00000465441 GMPPBQ9Y5P6 360 aa16.64■□□□□ 0.25
CSPG5-204ENST00000465441 TCRBV4S1A1TA0A5B7 111 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 E9PI62 339 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 ZFPL1O95159 310 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 DBTP11182 482 aaKnown RBP16.63■□□□□ 0.25
CSPG5-204ENST00000465441 IGLL1P15814 213 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 CD33P20138 364 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 CEACAM3P40198 252 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 ARHGDIBP52566 201 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 ZNF691Q5VV52 312 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 FOXB2Q5VYV0 432 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 CCDC121Q6ZUS5 278 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 SYS1Q8N2H4 156 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 CBR4Q8N4T8 237 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 NR1H4Q96RI1 486 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-204ENST00000465441 MYCBPQ99417 103 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-204ENST00000465441 PDCD1LG2Q9BQ51 273 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 OR6C3Q9NZP0 311 aa16.63■□□□□ 0.25
CSPG5-204ENST00000465441 KBTBD11-OT1A0A1B0GTJ5 212 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 SULT1B1O43704 296 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 NFYBP25208 207 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 OR3A4PP47883 348 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 MTNR1BP49286 362 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 RBM39Q14498 530 aaKnown RBP16.62■□□□□ 0.25
CSPG5-204ENST00000465441 C10orf99Q6UWK7 81 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 OR51T1Q8NGJ9 327 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms