RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 AESQ08117 197 aa13.66□□□□□ -0.22
HMGN1-210ENST00000464078 KPNB1Q14974 876 aaKnown RBP13.66□□□□□ -0.22
HMGN1-210ENST00000464078 PRSS35Q8N3Z0 413 aa13.66□□□□□ -0.22
HMGN1-210ENST00000464078 SPSB1Q96BD6 273 aa13.66□□□□□ -0.22
HMGN1-210ENST00000464078 ADI1Q9BV57 179 aa13.66□□□□□ -0.22
HMGN1-210ENST00000464078 RHOFQ9HBH0 211 aa13.66□□□□□ -0.22
HMGN1-210ENST00000464078 LSM4Q9Y4Z0 139 aaKnown RBP13.66□□□□□ -0.22
HMGN1-210ENST00000464078 NUDT19A8MXV4 375 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 OR2T7P0C7T2 308 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 T-ENOLP0DO92 83 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 DAPP51397 102 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 SNU13P55769 128 aaKnown RBP13.65□□□□□ -0.22
HMGN1-210ENST00000464078 ISL1P61371 349 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 PDZK1IP1Q13113 114 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 C12orf73Q69YU5 71 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 C18orf65Q6ZTR6 163 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 LHFPL2Q6ZUX7 228 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 ZNF695Q8IW36 515 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 C5orf56Q8N8D9 126 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 CHST4Q8NCG5 386 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 KLHL30-AS1Q8NEE0 82 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 ADAT3Q96EY9 351 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-210ENST00000464078 COQ2Q96H96 371 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 WARS2Q9UGM6 360 aaKnown RBP13.65□□□□□ -0.22
HMGN1-210ENST00000464078 GSTK1Q9Y2Q3 226 aa13.65□□□□□ -0.22
HMGN1-210ENST00000464078 AMMECR1Q9Y4X0 333 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-210ENST00000464078 DYNC2H1Q8NCM8 4307 aaKnown RBP13.65□□□□□ -0.22
HMGN1-210ENST00000464078 IGKV1-12A0A0C4DH73 117 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 A0A1W2PQL4 384 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-210ENST00000464078 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 C3orf84H3BNL1 204 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 KDM4BO94953 1096 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 ZFPL1O95159 310 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 IGKV1D-12P01611 117 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 SNRNP70P08621 437 aaKnown RBP13.64□□□□□ -0.23
HMGN1-210ENST00000464078 EPHA2P29317 976 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 KIR3DL2P43630 455 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 GNGT1P63211 74 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 SLC35B1P78383 322 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
HMGN1-210ENST00000464078 C17orf58Q2M2W7 97 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 NKAPLQ5M9Q1 402 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 UTF1Q5T230 341 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 OR56B4Q8NH76 319 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 TOMM40LQ969M1 308 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 RPEQ96AT9 228 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 KIRREL1Q96J84 757 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-210ENST00000464078 TBX5Q99593 518 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 OR6C3Q9NZP0 311 aa13.64□□□□□ -0.23
HMGN1-210ENST00000464078 TCRBV3S1A0A5B6 114 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 SERPINE3A8MV23 424 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 FAM107AO95990 144 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 IGHG2P01859 326 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 CGB3P0DN86 165 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 CGB7P0DN87 165 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 CALCBP10092 127 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 ATF1P18846 271 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 FLOT2Q14254 428 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 TFAP2CQ92754 450 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 RNF166Q96A37 237 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-210ENST00000464078 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 IL4I1Q96RQ9 567 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
HMGN1-210ENST00000464078 KBTBD11-OT1A0A1B0GTJ5 212 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 SLC33A1O00400 549 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-210ENST00000464078 HTR1FP30939 366 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 MADCAM1Q13477 382 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 KRBOX4Q5JUW0 171 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 Q6P435 159 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 SPATA24Q86W54 205 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 SAXO1Q8IYX7 474 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 DRAM1Q8N682 238 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 UTP4Q969X6 686 aaKnown RBP13.62□□□□□ -0.23
HMGN1-210ENST00000464078 RAX2Q96IS3 184 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 MBOAT4Q96T53 435 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 NCOR1P1Q9H4R4 102 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 KRT84Q9NSB2 600 aa13.62□□□□□ -0.23
HMGN1-210ENST00000464078 J3QR06 171 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 MT-ND2P03891 347 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 ISG15P05161 165 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 ZNF44P15621 663 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 TMEM11P17152 192 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 RAB7AP51149 207 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 ATXN7L3Q14CW9 347 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-210ENST00000464078 TMEM244Q5VVB8 128 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 FAM220AQ7Z4H9 259 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 SLC35E3Q7Z769 313 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 FOXRED2Q8IWF2 684 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 RDH10Q8IZV5 341 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 OR8H3Q8N146 312 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 STPG2Q8N412 459 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 OR10H4Q8NGA5 316 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 OR51T1Q8NGJ9 327 aa13.61□□□□□ -0.23
HMGN1-210ENST00000464078 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
HMGN1-210ENST00000464078 ENOPH1Q9UHY7 261 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms