RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TVP23BQ9NYZ1 205 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 ODAMA1E959 279 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 CCDC182A6NF36 153 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 LINC01548A6NM66 108 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF729A6NN14 1252 aaPredicted RBP11.35□□□□□ -0.59
SMC1A-204ENST00000463684 H3BSH0 61 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 GNGT2O14610 69 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 OR2H2O95918 312 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 CST1P01037 141 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 ELANEP08246 267 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 POU3F4P49335 361 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 RAB7AP51149 207 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 BNIP1Q12981 228 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 FOXE3Q13461 319 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 MADCAM1Q13477 382 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 KRBOX4Q5JUW0 171 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 FAM27D1Q5T7N8 215 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 DHFR2Q86XF0 187 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 CCDC54Q8NEL0 328 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 MNTQ99583 582 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 CHST5Q9GZS9 411 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 KRT84Q9NSB2 600 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 ING3Q9NXR8 418 aa11.35□□□□□ -0.59
SMC1A-204ENST00000463684 HUWE1Q7Z6Z7 4374 aaKnown RBP11.34□□□□□ -0.59
SMC1A-204ENST00000463684 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF670-ZNF695F2Z2N8 137 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 J3QR06 171 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 CCRL2O00421 344 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 RPP14O95059 124 aaKnown RBP11.34□□□□□ -0.59
SMC1A-204ENST00000463684 IGKV1D-33P01593 117 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 IGKV1-33P01594 117 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 MNAT1P51948 309 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 MTCP1P56278 107 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 SCN1BQ07699 218 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 SLC35F2Q8IXU6 374 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 OR8H3Q8N146 312 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF565Q8N9K5 539 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 DNAAF1Q8NEP3 725 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 CITED4Q96RK1 184 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 HMG20AQ9NP66 347 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 H2AFY2Q9P0M6 372 aaPredicted RBP11.34□□□□□ -0.59
SMC1A-204ENST00000463684 TAGLN3Q9UI15 199 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 DSCAML1Q8TD84 2053 aa11.34□□□□□ -0.59
SMC1A-204ENST00000463684 DNAH7Q8WXX0 4024 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 KBTBD11-OT1A0A1B0GTJ5 212 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 A0A1W2PPI3 338 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
SMC1A-204ENST00000463684 RAP2AP10114 183 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 ZNF44P15621 663 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 GPR12P47775 334 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 C17orf58Q2M2W7 97 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 UTF1Q5T230 341 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 YIPF7Q8N8F6 280 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 OR11H1Q8NG94 326 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 PP6455Q8WZ26 134 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 C10orf35Q96D05 121 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 KIRREL1Q96J84 757 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 SLC25A19Q9HC21 320 aa11.33□□□□□ -0.6
SMC1A-204ENST00000463684 MRM2Q9UI43 246 aaKnown RBP11.33□□□□□ -0.6
SMC1A-204ENST00000463684 IGHV3-7P01780 117 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 KRT8P05787 483 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 CSN2P05814 226 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 PDZK1IP1Q13113 114 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 TMEM179BQ7Z7N9 219 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 TGIF2LXQ8IUE1 241 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 CHST4Q8NCG5 386 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 ABCG5Q9H222 651 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 LIN7CQ9NUP9 197 aaKnown RBP11.32□□□□□ -0.6
SMC1A-204ENST00000463684 CLN6Q9NWW5 311 aa11.32□□□□□ -0.6
SMC1A-204ENST00000463684 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 MPZL2O60487 215 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 OCM2P0CE71 109 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 OCMP0CE72 109 aaPredicted RBP11.31□□□□□ -0.6
SMC1A-204ENST00000463684 ANXA8P13928 327 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 VDAC1P21796 283 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 PRKACBP22694 351 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 C21orf33P30042 268 aaPredicted RBP11.31□□□□□ -0.6
SMC1A-204ENST00000463684 FHL3Q13643 280 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 ZNF429Q86V71 674 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 COQ2Q96H96 371 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 LRGUKQ96M69 825 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 ARL8BQ9NVJ2 186 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 IDI2-AS1Q9NZ38 188 aa11.31□□□□□ -0.6
SMC1A-204ENST00000463684 NKX1-2Q9UD57 310 aaPredicted RBP11.31□□□□□ -0.6
SMC1A-204ENST00000463684 PSG11Q9UQ72 335 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms