RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SLC33A1O00400 549 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 OPN1MWP04001 364 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 LIMS3P0CW19 117 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 LIMS4P0CW20 117 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 OPN1MW2P0DN77 364 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 OPN1MW3P0DN78 364 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 GLIPR1P48060 266 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 MTNR1BP49286 362 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 GBX2P52951 348 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 SNU13P55769 128 aaKnown RBP16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 CCDC58Q4VC31 144 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 TRAPPC6BQ86SZ2 158 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 ABHD12Q8N2K0 398 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 CPNE2Q96FN4 548 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 COQ2Q96H96 371 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 NKX3-1Q99801 234 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 PDCD1LG2Q9BQ51 273 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 DPM3Q9P2X0 92 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 DHDHQ9UQ10 334 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 HILPDAQ9Y5L2 63 aa16.51■□□□□ 0.23
PDLIM4-205ENST00000463615 F2RL2O00254 374 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 WBP4O75554 376 aaKnown RBP16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 ZNF44P15621 663 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 CDK2P24941 298 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 PAX5Q02548 391 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 SLC34A1Q06495 639 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 AESQ08117 197 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 ZNF691Q5VV52 312 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 ASCL4Q6XD76 172 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 C16orf82Q7Z2V1 217 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 TMEM219Q86XT9 240 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 OR51T1Q8NGJ9 327 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 NDNFQ8TB73 568 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 ZNF596Q8TC21 504 aa16.5■□□□□ 0.23
PDLIM4-205ENST00000463615 H3BUI4 141 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 DEGS1O15121 323 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 HCKP08631 526 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 CGB3P0DN86 165 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 CGB7P0DN87 165 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 TMEM225BP0DP42 221 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 VSIG10L2P0DP72 767 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 HABP2Q14520 560 aaPredicted RBP16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 PRAMEF5Q5TYX0 476 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 RGP1Q92546 391 aaPredicted RBP16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 CREB3L1Q96BA8 519 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 LINC00574Q9H8X3 128 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 OR6C3Q9NZP0 311 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 KIAA2026Q5HYC2 2103 aa16.49■□□□□ 0.23
PDLIM4-205ENST00000463615 ZNF729A6NN14 1252 aaPredicted RBP16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 EBAG9O00559 213 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 ALDOBP05062 364 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 JUNBP17275 347 aaPredicted RBP16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 RAB3AP20336 220 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 DCKP27707 260 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 PTGFRP43088 359 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 IL13RA2Q14627 380 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 KRBOX4Q5JUW0 171 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 RPL22L1Q6P5R6 122 aaKnown RBP16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 TSEN15Q8WW01 171 aaKnown RBP16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 LIN7BQ9HAP6 207 aa16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 SMPD3Q9NY59 655 aaPredicted RBP16.48■□□□□ 0.23
PDLIM4-205ENST00000463615 LEUTXA8MZ59 168 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 OOSP1A8MZH6 123 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 FBXO24O75426 580 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 GDNFP39905 211 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 GTF2A1P52655 376 aaPredicted RBP16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 BLCAPP62952 87 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 EMX1Q04741 257 aaPredicted RBP16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 C17orf58Q2M2W7 97 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 KPRPQ5T749 579 aaPredicted RBP16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 BAIAP2L2Q6UXY1 529 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 C11orf44Q8N8P7 122 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 GPR148Q8TDV2 347 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 OCSTAMPQ9BR26 566 aa16.47■□□□□ 0.23
PDLIM4-205ENST00000463615 KBTBD11-OT1A0A1B0GTJ5 212 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 LY6LH3BQJ8 138 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 GABRPO00591 440 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 BRS3P32247 399 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 KCNJ3P48549 501 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 SCN1BQ07699 218 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 SMN1Q16637 294 aaKnown RBP16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 ZSCAN26Q16670 478 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 HLA-DRB5Q30154 266 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 Q6ZS46 218 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 NDUFA11Q86Y39 141 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 ZNF555Q8NEP9 628 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 OR4D6Q8NGJ1 314 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 OR51A2Q8NGJ7 313 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 CNIH3Q8TBE1 160 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 ZNF286AQ9HBT8 521 aa16.46■□□□□ 0.23
PDLIM4-205ENST00000463615 TRAV24A0A0B4J272 114 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 IRGMA1A4Y4 181 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 ADARB2-AS1A8MUL3 147 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 H0YJX3 145 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 BUB1B-PAK6H3BSN5 160 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 MAGEB3O15480 346 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 OGG1O15527 345 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 CD2P06729 351 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 CEACAM3P40198 252 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 ARHGDIBP52566 201 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms