RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 DEGS1O15121 323 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 CSN2P05814 226 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 VSIG10L2P0DP72 767 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 HTR1DP28221 377 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 SLC34A1Q06495 639 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 CDK5R1Q15078 307 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 SMN1Q16637 294 aaKnown RBP15.25■□□□□ 0.03
VARS-220ENST00000461874 PRAMEF5Q5TYX0 476 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 ZNF691Q5VV52 312 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 OR52W1Q6IF63 320 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 ZNF529Q6P280 563 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 BAIAP2L2Q6UXY1 529 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 HEPN1Q6WQI6 88 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 ABHD12Q8N2K0 398 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 C11orf44Q8N8P7 122 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 OR4P4Q8NGL7 312 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 SERTAD4Q9NUC0 356 aa15.25■□□□□ 0.03
VARS-220ENST00000461874 ODAMA1E959 279 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 FAM90A22PA8MWA6 464 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 F2RL2O00254 374 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 RAB3AP20336 220 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 CDK2P24941 298 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 MTNR1BP49286 362 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 HABP2Q14520 560 aaPredicted RBP15.24■□□□□ 0.03
VARS-220ENST00000461874 KIAA2026Q5HYC2 2103 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 HIST2H2BDQ6DRA6 164 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 ELP2Q6IA86 826 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 RPL22L1Q6P5R6 122 aaKnown RBP15.24■□□□□ 0.03
VARS-220ENST00000461874 RTN4RL2Q86UN3 420 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 PXT1Q8NFP0 134 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 RGP1Q92546 391 aaPredicted RBP15.24■□□□□ 0.03
VARS-220ENST00000461874 COQ2Q96H96 371 aa15.24■□□□□ 0.03
VARS-220ENST00000461874 DCKP27707 260 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 SOX2P48431 317 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 ETV1P50549 477 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 BDH1Q02338 343 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 ZSCAN26Q16670 478 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 CCDC58Q4VC31 144 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 KRBOX4Q5JUW0 171 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 XAF1Q6GPH4 301 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 OR51A2Q8NGJ7 313 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 CPNE2Q96FN4 548 aaPredicted RBP15.23■□□□□ 0.03
VARS-220ENST00000461874 PRSS22Q9GZN4 317 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 DPM3Q9P2X0 92 aa15.23■□□□□ 0.03
VARS-220ENST00000461874 TET2Q6N021 2002 aaPredicted RBP15.22■□□□□ 0.03
VARS-220ENST00000461874 MAGEB3O15480 346 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 IGLV1-47P01700 117 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 CD34P28906 385 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 GDNFP39905 211 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 ATXN7L3Q14CW9 347 aaPredicted RBP15.22■□□□□ 0.03
VARS-220ENST00000461874 TMPRSS11AQ6ZMR5 421 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 SATL1Q86VE3 508 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 ZNF596Q8TC21 504 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 GPR148Q8TDV2 347 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 STMN2Q93045 179 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 NR1H4Q96RI1 486 aaPredicted RBP15.22■□□□□ 0.03
VARS-220ENST00000461874 ING3Q9NXR8 418 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 TAS2R4Q9NYW5 299 aa15.22■□□□□ 0.03
VARS-220ENST00000461874 TGP01266 2768 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 PRKDCP78527 4128 aaKnown RBP15.21■□□□□ 0.03
VARS-220ENST00000461874 IRGMA1A4Y4 181 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 H0YJX3 145 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 GABRPO00591 440 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 CLIC3O95833 236 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 CD2P06729 351 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 PTGFRP43088 359 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 BLCAPP62952 87 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 OR2G6Q5TZ20 316 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 ASCL4Q6XD76 172 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 Q8NFD4 153 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 OR4D6Q8NGJ1 314 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 OR51T1Q8NGJ9 327 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 CNIH3Q8TBE1 160 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 WIPF2Q8TF74 440 aaPredicted RBP15.21■□□□□ 0.03
VARS-220ENST00000461874 TNFAIP8L1Q8WVP5 186 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 GPER1Q99527 375 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 PPIL3Q9H2H8 161 aaKnown RBP15.21■□□□□ 0.03
VARS-220ENST00000461874 ZNF286AQ9HBT8 521 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 OR6C3Q9NZP0 311 aa15.21■□□□□ 0.03
VARS-220ENST00000461874 SIRT4Q9Y6E7 314 aaPredicted RBP15.21■□□□□ 0.03
VARS-220ENST00000461874 A0A087X0M5 115 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 TRAV24A0A0B4J272 114 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 A0A1B0GX30 115 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 FAM172BPA6NC97 362 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 ZNF729A6NN14 1252 aaPredicted RBP15.2■□□□□ 0.02
VARS-220ENST00000461874 LEUTXA8MZ59 168 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 H3BUI4 141 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 ALDOBP05062 364 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 C17orf58Q2M2W7 97 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 Q6ZS46 218 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 WNT10AQ9GZT5 417 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 NCOR1P1Q9H4R4 102 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 BABAM2Q9NXR7 383 aa15.2■□□□□ 0.02
VARS-220ENST00000461874 DIMT1Q9UNQ2 313 aaKnown RBP15.2■□□□□ 0.02
VARS-220ENST00000461874 KBTBD11-OT1A0A1B0GTJ5 212 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 HSPB6O14558 160 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 OGG1O15527 345 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 FBXO24O75426 580 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 OPN1MWP04001 364 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 OPN1MW2P0DN77 364 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms