RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PXT1Q8NFP0 134 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 OR52I1Q8NGK6 324 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 OR4P4Q8NGL7 312 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 APH1BQ8WW43 257 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 CLEC7AQ9BXN2 247 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 WNT10AQ9GZT5 417 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 CHST6Q9GZX3 395 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 AMBNQ9NP70 447 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 FGF20Q9NP95 211 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-207ENST00000461798 ABCB10Q9NRK6 738 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 FOXJ3Q9UPW0 622 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 GSTK1Q9Y2Q3 226 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 PCDHGB5Q9Y5G0 923 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 A0A087X0M5 115 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 TRGV10A0A0A0MS01 117 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 A0A1B0GX30 115 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 ODAMA1E959 279 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 H3BUI4 141 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 SIRPB1O00241 398 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 SULT1B1O43704 296 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 IGLV1-47P01700 117 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 OCM2P0CE71 109 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 OCMP0CE72 109 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-207ENST00000461798 LIMS3P0CW19 117 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 LIMS4P0CW20 117 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 CGB3P0DN86 165 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 CGB7P0DN87 165 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 CALCBP10092 127 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 HTR1DP28221 377 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 MTNR1BP49286 362 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 GBX2P52951 348 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-207ENST00000461798 AESQ08117 197 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 IL18R1Q13478 541 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 CDK5R1Q15078 307 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 CCDC58Q4VC31 144 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 ABHD12Q8N2K0 398 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 OR51T1Q8NGJ9 327 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 OR5AK2Q8NH90 309 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 FAM110DQ8TAY7 271 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-207ENST00000461798 RFT1Q96AA3 541 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 RDH12Q96NR8 316 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 SPACA5Q96QH8 159 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 GAL3ST2Q9H3Q3 398 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 DPM3Q9P2X0 92 aa7.36□□□□□ -1.23
BRCA1-207ENST00000461798 LEUTXA8MZ59 168 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 LY6LH3BQJ8 138 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 SLC33A1O00400 549 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 EBAG9O00559 213 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 DEGS1O15121 323 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 WBP4O75554 376 aaKnown RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 OPN1MWP04001 364 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 ALDOBP05062 364 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 OPN1MW2P0DN77 364 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 OPN1MW3P0DN78 364 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 TMEM225BP0DP42 221 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 CDK2P24941 298 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 DCKP27707 260 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 GLIPR1P48060 266 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 SNU13P55769 128 aaKnown RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 BLCAPP62952 87 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 PAX5Q02548 391 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 EMX1Q04741 257 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 SLC34A1Q06495 639 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 PLA1AQ53H76 456 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF691Q5VV52 312 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 RPL22L1Q6P5R6 122 aaKnown RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 C16orf82Q7Z2V1 217 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 TRAPPC6BQ86SZ2 158 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 OR5D18Q8NGL1 313 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 NDNFQ8TB73 568 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF596Q8TC21 504 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 CREB3L1Q96BA8 519 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 CPNE2Q96FN4 548 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 COQ2Q96H96 371 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 NKX3-1Q99801 234 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-207ENST00000461798 PDCD1LG2Q9BQ51 273 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 OCSTAMPQ9BR26 566 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 OR6C3Q9NZP0 311 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 DHDHQ9UQ10 334 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 HILPDAQ9Y5L2 63 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 DSCAML1Q8TD84 2053 aa7.35□□□□□ -1.23
BRCA1-207ENST00000461798 KBTBD11-OT1A0A1B0GTJ5 212 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 IRGMA1A4Y4 181 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF729A6NN14 1252 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 OOSP1A8MZH6 123 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 F2RL2O00254 374 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 OGG1O15527 345 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 HCKP08631 526 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 VSIG10L2P0DP72 767 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF44P15621 663 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 JUNBP17275 347 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 RAB3AP20336 220 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 BRS3P32247 399 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 GDNFP39905 211 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 GTF2A1P52655 376 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 HABP2Q14520 560 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 IL13RA2Q14627 380 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 C17orf58Q2M2W7 97 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms