RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-208	ENST00000461047	SPRN	Q5BIV9	151 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	NHLRC3	Q5JS37	347 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	ATAD3C	Q5T2N8	411 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	RAB12	Q6IQ22	244 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	SFXN4	Q6P4A7	337 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	GDPD3	Q7L5L3	318 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047		Q8N1X5	172 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	TEX29	Q8N6K0	151 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	ASCC1	Q8N9N2	400 aa	Known RBP	4.96	□□□□□ -1.62
NUP98-208	ENST00000461047		Q8NFD4	153 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	OR51D1	Q8NGF3	324 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	OR5T2	Q8NGG2	359 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	OR4D6	Q8NGJ1	314 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM46B	Q96A09	425 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047		Q96MF0	132 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	CMTM3	Q96MX0	182 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	TMEM246	Q9BRR3	403 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	SELENOI	Q9C0D9	397 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	BPESC1	Q9GZL8	116 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	ATG5	Q9H1Y0	275 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	PPIL3	Q9H2H8	161 aa	Known RBP	4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	PATZ1	Q9HBE1	687 aa	Known RBP	4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	HES4	Q9HCC6	221 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	RBFOX1	Q9NWB1	397 aa	Known RBP	4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	KAAG1	Q9UBP8	84 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	LPAR3	Q9UBY5	353 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	CLN8	Q9UBY8	286 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	OR5V1	Q9UGF6	321 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	RABL2B	Q9UNT1	228 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	CACNG2	Q9Y698	323 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	CEPT1	Q9Y6K0	416 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	PKDREJ	Q9NTG1	2253 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	DOPEY2	Q9Y3R5	2298 aa		4.96	□□□□□ -1.62
NUP98-208	ENST00000461047	GCN1	Q92616	2671 aa	Known RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	CAD	P27708	2225 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	IGHV3OR15-7	A0A075B7D8	119 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047		A0A0A6YYH2	397 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047		A6NJ64	397 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	VWC2L	B2RUY7	222 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047		B4DSR2	109 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	WNT9B	O14905	357 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	RGS5	O15539	181 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	CA11	O75493	328 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	OR7C1	O76099	320 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	GYPA	P02724	150 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SFTPB	P07988	381 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	WNT2	P09544	360 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	PSG2	P11465	335 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	NDUFB7	P17568	137 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	FUT3	P21217	361 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	NPBWR2	P48146	333 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SNU13	P55769	128 aa	Known RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	RBM11	P57052	281 aa	Known RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	OR10A3	P58181	314 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	RPS27A	P62979	156 aa	Known RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	HNRNPA0	Q13151	305 aa	Known RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	FOXE3	Q13461	319 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	ZNF146	Q15072	292 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	TAF9	Q16594	264 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	PAN3	Q58A45	887 aa	Known RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	STUM	Q69YW2	141 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	CYB5R2	Q6BCY4	276 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	ASPHD2	Q6ICH7	369 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM166A	Q6J272	317 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	BTNL3	Q6UXE8	466 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	DNM1P46	Q6ZS02	220 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SLC16A12	Q6ZSM3	486 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	C1QL2	Q7Z5L3	287 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	CMTM4	Q8IZR5	234 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	ZNF565	Q8N9K5	539 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	TMEM185A	Q8NFB2	350 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	OR10K1	Q8NGX5	313 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	ANGPTL6	Q8NI99	470 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	RAB40A	Q8WXH6	277 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SLC25A28	Q96A46	364 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SDSL	Q96GA7	329 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SNX22	Q96L94	193 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	ZNF488	Q96MN9	340 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	CCL13	Q99616	98 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	FGF23	Q9GZV9	251 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	WDR13	Q9H1Z4	485 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	RIMS4	Q9H426	269 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	NARFL	Q9H6Q4	476 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	IFT22	Q9H7X7	185 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	PLEKHJ1	Q9NW61	149 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	SPATA2	Q9UM82	520 aa		4.95	□□□□□ -1.62
NUP98-208	ENST00000461047	LOC105371242	A0A075B767	164 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	IGHV4-30-2	A0A087WSY4	118 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	IGKV1-12	A0A0C4DH73	117 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	hADV38S2	A0JD32	116 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	SMIM30	A4D0T7	59 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	DPPA5	A6NC42	116 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	CEACAM18	A8MTB9	384 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	TMEM14DP	A8MWL7	114 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM25A	B3EWG3	89 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM25C	B3EWG5	89 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM25G	B3EWG6	89 aa		4.94	□□□□□ -1.62
NUP98-208	ENST00000461047		H3BMQ9	156 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms