RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 FAIMQ9NVQ4 179 aa3.05□□□□□ -1.92
CKAP2-204ENST00000459902 NXT1Q9UKK6 140 aaKnown RBP3.05□□□□□ -1.92
CKAP2-204ENST00000459902 ARL2BPQ9Y2Y0 163 aa3.05□□□□□ -1.92
CKAP2-204ENST00000459902 MRC2Q9UBG0 1479 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 TICRRQ7Z2Z1 1910 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 IGHV1-3A0A0C4DH29 117 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 A0A1B0GTI1 187 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 A0A1B0GV72 72 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 METTL15A6NJ78 407 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 RFPL4AA6NLU0 287 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 RFPL4AL1F8VTS6 287 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 M0QXV9 152 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 M0R036 132 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 ACOX3O15254 700 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 SERPINA1P01009 418 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 IGKV4-1P06312 121 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 NBEAP1P0C6P0 100 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 THRAP10827 490 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 BGNP21810 368 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 COILP38432 576 aaPredicted RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 NBL1P41271 181 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 IDH2P48735 452 aaKnown RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 AP2S1P53680 142 aaPredicted RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 TMEM33P57088 247 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 LSM6P62312 80 aaKnown RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 TNXAQ16473 311 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 SLC25A35Q3KQZ1 300 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 SLC36A2Q495M3 483 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 ELP2Q6IA86 826 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 APOBEC3HQ6NTF7 200 aaKnown RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 S100A7AQ86SG5 101 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 MDP1Q86V88 176 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 KIF2BQ8N4N8 673 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 LRRC75AQ8NAA5 344 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 OR10W1Q8NGF6 305 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 OR5AR1Q8NGP9 310 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 OR52E5Q8NH55 327 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 CDS1Q92903 461 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 YIPF5Q969M3 257 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 WDR34Q96EX3 536 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 KIFC1Q9BW19 673 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 DDA1Q9BW61 102 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 ULBP1Q9BZM6 244 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 PORCNQ9H237 461 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 DHX35Q9H5Z1 703 aaKnown RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 PLEKHJ1Q9NW61 149 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 BABAM2Q9NXR7 383 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 DHCR7Q9UBM7 475 aaKnown RBP3.04□□□□□ -1.92
CKAP2-204ENST00000459902 SMPXQ9UHP9 88 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 NDUFAF1Q9Y375 327 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 USH1CQ9Y6N9 552 aa3.04□□□□□ -1.92
CKAP2-204ENST00000459902 KDM5BQ9UGL1 1544 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 KIAA0232Q92628 1395 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 ZNF532Q9HCE3 1301 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SHANK1Q9Y566 2161 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PQLC2LA1A4F0 135 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 TXNDC9O14530 226 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PFDN6O15212 129 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SLC22A1O15245 554 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SLC16A4O15374 487 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 FADS1O60427 444 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 LDOC1O95751 146 aaPredicted RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PPBPP02775 128 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 MT-ND4P03905 459 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 TCRBP04435 133 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 NQO1P15559 274 aaKnown RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PMCHP20382 165 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PHBP35232 272 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 MYCNOSP40205 109 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 MAGEA12P43365 314 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SRP9P49458 86 aaKnown RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 RBX1P62877 108 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 RELAQ04206 551 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 AESQ08117 197 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 TAF1AQ15573 450 aaPredicted RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 TRIQKQ629K1 86 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 RPL13AP3Q6NVV1 102 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SPINT4Q6UDR6 99 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 CYHR1Q6ZMK1 362 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 LYG2Q86SG7 212 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 C8orf31Q8N9H6 132 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 OR11L1Q8NGX0 322 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 OR1P1Q8NH06 330 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PIGXQ8TBF5 258 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 KLF14Q8TD94 323 aaPredicted RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PPWD1Q96BP3 646 aaKnown RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 TAMM41Q96BW9 452 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 RNF170Q96K19 258 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PPP1R2P1Q96PQ5 205 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 HOPXQ9BPY8 73 aaPredicted RBP3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SLC19A3Q9BZV2 496 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 ANKHQ9HCJ1 492 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 SDHAF2Q9NX18 166 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 GUCA1BQ9UMX6 200 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 PRELID3BQ9Y3B1 194 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 NUBP2Q9Y5Y2 271 aa3.03□□□□□ -1.92
CKAP2-204ENST00000459902 ZFYVE9O95405 1425 aa3.02□□□□□ -1.93
CKAP2-204ENST00000459902 A0A1B0GV90 55 aa3.02□□□□□ -1.93
CKAP2-204ENST00000459902 VPS37CA5D8V6 355 aaPredicted RBP3.02□□□□□ -1.93
CKAP2-204ENST00000459902 C16orf90A8MZG2 172 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms