RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CDX1P47902 265 aaPredicted RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 CSNK1A1P48729 337 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 OR1D5P58170 312 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ENDOGQ14249 297 aaKnown RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 DEFB133Q30KQ1 61 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 SP6Q3SY56 376 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ABCA11PQ4W5N1 156 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 FBXW12Q6X9E4 464 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ASCL4Q6XD76 172 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 KMT5CQ86Y97 462 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 PLXDC1Q8IUK5 500 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 LGI3Q8N145 548 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 Q8NFD4 153 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 OR52M1Q8NGK5 317 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 CD300LFQ8TDQ1 290 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 PIGTQ969N2 578 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 MARS2Q96GW9 593 aaKnown RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 BOD1Q96IK1 185 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ZNF845Q96IR2 970 aaPredicted RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 SYT3Q9BQG1 590 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 SF3B5Q9BWJ5 86 aaKnown RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 HIPK2Q9H2X6 1198 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 BCO1Q9HAY6 547 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 SLC2A9Q9NRM0 540 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 RCL1Q9Y2P8 373 aaKnown RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 TMED3Q9Y3Q3 217 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 MUC6Q6W4X9 2439 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 CCDC187A0A096LP49 1063 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 IFITM10A6NMD0 228 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 AHRRA9YTQ3 701 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 TSTD3H0UI37 97 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 OR13C7P0DN81 318 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 HNF1AP20823 631 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 CD27P26842 260 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
VPS50-208ENST00000458707 DLX2Q07687 328 aaPredicted RBP7.37□□□□□ -1.23
VPS50-208ENST00000458707 NCMAPQ5T1S8 102 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 SPSB3Q6PJ21 355 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 SHISA6Q6ZSJ9 500 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 P4HA3Q7Z4N8 544 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 GPR137CQ8N3F9 429 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 SUMF2Q8NBJ7 301 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 HSD17B11Q8NBQ5 300 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 OR2M3Q8NG83 312 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 FAM213BQ8TBF2 198 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 THAP3Q8WTV1 239 aaPredicted RBP7.37□□□□□ -1.23
VPS50-208ENST00000458707 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 NABP1Q96AH0 204 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 SPSB1Q96BD6 273 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 MOB3AQ96BX8 217 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 FAAP24Q9BTP7 215 aa7.37□□□□□ -1.23
VPS50-208ENST00000458707 ELL3Q9HB65 397 aaPredicted RBP7.37□□□□□ -1.23
VPS50-208ENST00000458707 IGHV1OR15-9A0A0B4J2B8 117 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 TRBV11-1A0A0K0K1C0 115 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 OR5H15A6NDH6 313 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 CXorf65A6NEN9 183 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 ZNF850A8MQ14 1090 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 F5H5K5 113 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 DUX1O43812 170 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 PITX3O75364 302 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 CDS2O95674 445 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 SFTPDP35247 375 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 RRADP55042 308 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 FOXL2P58012 376 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 H3F3AP84243 136 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 EWSR1Q01844 656 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS50-208ENST00000458707 NHLH1Q02575 133 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 KIAA0141Q14154 515 aaPredicted RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 ZNF266Q14584 549 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 OR8G1Q15617 311 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 RHBDD2Q6NTF9 364 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 WDR73Q6P4I2 378 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 MEX3BQ6ZN04 569 aaKnown RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 TMEM182Q6ZP80 229 aaPredicted RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 FBXL14Q8N1E6 418 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 FADS6Q8N9I5 356 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 OR5L2Q8NGL0 311 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 MR1Q95460 341 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 TOMM40LQ969M1 308 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 RARRES2Q99969 163 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 PARD6GQ9BYG4 376 aaPredicted RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 KIAA1456Q9P272 454 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 METTL12A8MUP2 240 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 H3BQ15 152 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 RPL36A-HNRNPH2H7BZ11 118 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 M0R135 149 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 HSD17B6O14756 317 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 DKK1O94907 266 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 SRP19P09132 144 aaKnown RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 METTL15P1P0C7V9 234 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 OPRM1P35372 400 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 MTCP1P56278 107 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 CLDN17P56750 224 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 SRPXP78539 464 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 GNMTQ14749 295 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 ELOBQ15370 118 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 RSU1Q15404 277 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms