RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 ODAMA1E959 279 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 FAM172BPA6NC97 362 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
LINC01248-201ENST00000458264 LY6LH3BQJ8 138 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 IGKV1D-12P01611 117 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 MT-ND2P03891 347 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 CSN2P05814 226 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 FAM106CPP0CH98 169 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 ZNF44P15621 663 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 GDNFP39905 211 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 SCN1BQ07699 218 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 C9orf152Q5JTZ5 239 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 KRBOX4Q5JUW0 171 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 FDX2Q6P4F2 183 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 C10orf99Q6UWK7 81 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 CHST4Q8NCG5 386 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 RFT1Q96AA3 541 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 FRRS1LQ9P0K9 344 aa11.8□□□□□ -0.52
LINC01248-201ENST00000458264 WI2-2373I1.2A0A1W2PRP0 233 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 ZNF729A6NN14 1252 aaPredicted RBP11.79□□□□□ -0.52
LINC01248-201ENST00000458264 POLR2IP36954 125 aaKnown RBP11.79□□□□□ -0.52
LINC01248-201ENST00000458264 OR3A4PP47883 348 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 EGFEM1PQ0D2K5 195 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 Q6P435 159 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 THNSL2Q86YJ6 484 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 LINC00482Q8N8I6 264 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 OR51D1Q8NGF3 324 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 DPF1Q92782 380 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 GABARAPL3Q9BY60 117 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 RIBC2Q9H4K1 309 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 PCDHB16Q9NRJ7 776 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 OR6C3Q9NZP0 311 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 MOB4Q9Y3A3 225 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 AP4S1Q9Y587 144 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 HSPE1-MOB4S4R3N1 261 aa11.79□□□□□ -0.52
LINC01248-201ENST00000458264 PSMB11A5LHX3 300 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 E9PQ18 207 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
LINC01248-201ENST00000458264 DEGS1O15121 323 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 FCGR1AP12314 374 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 CCR9P51686 369 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 RBM39Q14498 530 aaKnown RBP11.78□□□□□ -0.52
LINC01248-201ENST00000458264 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 OR13C3Q8NGS6 347 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 OR13C9Q8NGT0 318 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 OR9G1Q8NH87 305 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 TRUB1Q8WWH5 349 aaKnown RBP11.78□□□□□ -0.52
LINC01248-201ENST00000458264 RPEQ96AT9 228 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 COQ2Q96H96 371 aa11.78□□□□□ -0.52
LINC01248-201ENST00000458264 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
LINC01248-201ENST00000458264 KBTBD11-OT1A0A1B0GTJ5 212 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 DAPL1A0PJW8 107 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A18PA6NE21 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A16PA6NEW6 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A20PA6NIJ5 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A9PA6NNJ1 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A12PA8MX19 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A5PA8MXJ8 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 SLC16A6O15403 523 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 HTR1AP08908 422 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A15PP0C7V4 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A13PP0C7W8 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A14PP0C7W9 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 FAM90A24PP0C7X0 464 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 NFYBP25208 207 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.53
LINC01248-201ENST00000458264 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
LINC01248-201ENST00000458264 C11orf87Q6NUJ2 197 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
LINC01248-201ENST00000458264 ZNF565Q8N9K5 539 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 OR5D18Q8NGL1 313 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 TOMM40LQ969M1 308 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 HRASLS5Q96KN8 279 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 SPACA5Q96QH8 159 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 ZNF649Q9BS31 505 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.53
LINC01248-201ENST00000458264 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 ZCCHC4Q9H5U6 513 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 ING3Q9NXR8 418 aa11.77□□□□□ -0.53
LINC01248-201ENST00000458264 J3QRE1 110 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 CGB3P0DN86 165 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 CGB7P0DN87 165 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 DBTP11182 482 aaKnown RBP11.76□□□□□ -0.53
LINC01248-201ENST00000458264 SLC6A1P30531 599 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
LINC01248-201ENST00000458264 CD69Q07108 199 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 BNIP1Q12981 228 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 DCTN2Q13561 401 aaKnown RBP11.76□□□□□ -0.53
LINC01248-201ENST00000458264 ATXN7L3Q14CW9 347 aaPredicted RBP11.76□□□□□ -0.53
LINC01248-201ENST00000458264 ETV3LQ6ZN32 361 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 RNF144BQ7Z419 303 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 OR51A4Q8NGJ6 313 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 OR10AC1Q8NH08 325 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 CHPT1Q8WUD6 406 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 RNFT2Q96EX2 444 aa11.76□□□□□ -0.53
LINC01248-201ENST00000458264 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms