RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 MBOAT4Q96T53 435 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 OR6C3Q9NZP0 311 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 AP4S1Q9Y587 144 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 ZNF729A6NN14 1252 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-220ENST00000458038 LY6LH3BQJ8 138 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 APOL3O95236 402 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 AMY1AP04745 511 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 AMY2AP04746 511 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 RPSAP08865 295 aaKnown RBP17.14■□□□□ 0.33
CPNE1-220ENST00000458038 CCR9P51686 369 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 SNU13P55769 128 aaKnown RBP17.14■□□□□ 0.33
CPNE1-220ENST00000458038 ZNF85Q03923 595 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 EGFEM1PQ0D2K5 195 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 OSR2Q8N2R0 312 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 OR51D1Q8NGF3 324 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 TRUB1Q8WWH5 349 aaKnown RBP17.14■□□□□ 0.33
CPNE1-220ENST00000458038 DPF1Q92782 380 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 RNF166Q96A37 237 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-220ENST00000458038 OSBPL10Q9BXB5 764 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 GABARAPL3Q9BY60 117 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 ZNF286AQ9HBT8 521 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 INPP5EQ9NRR6 644 aa17.14■□□□□ 0.33
CPNE1-220ENST00000458038 CALCBP10092 127 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 ZNF44P15621 663 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 SLC6A1P30531 599 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 DCTN2Q13561 401 aaKnown RBP17.13■□□□□ 0.33
CPNE1-220ENST00000458038 DEFB121Q5J5C9 76 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 KHDC1LQ5JSQ8 128 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 KRBOX4Q5JUW0 171 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 BAIAP2L2Q6UXY1 529 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 ZNF565Q8N9K5 539 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-220ENST00000458038 FRRS1LQ9P0K9 344 aa17.13■□□□□ 0.33
CPNE1-220ENST00000458038 AMMECR1Q9Y4X0 333 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-220ENST00000458038 IGKV1-12A0A0C4DH73 117 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 E9PQ18 207 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 IGKV1D-12P01611 117 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 OR9G1Q8NH87 305 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 MCRIP2Q9BUT9 160 aaKnown RBP17.12■□□□□ 0.33
CPNE1-220ENST00000458038 NCOR1P1Q9H4R4 102 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 ZMAT5Q9UDW3 170 aaKnown RBP17.12■□□□□ 0.33
CPNE1-220ENST00000458038 MOB4Q9Y3A3 225 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 HSPE1-MOB4S4R3N1 261 aa17.12■□□□□ 0.33
CPNE1-220ENST00000458038 KBTBD11-OT1A0A1B0GTJ5 212 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 PSMB11A5LHX3 300 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A18PA6NE21 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A16PA6NEW6 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A20PA6NIJ5 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A9PA6NNJ1 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A12PA8MX19 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A5PA8MXJ8 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 DEGS1O15121 323 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 HTR1AP08908 422 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A15PP0C7V4 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A13PP0C7W8 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A14PP0C7W9 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 FAM90A24PP0C7X0 464 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 DBTP11182 482 aaKnown RBP17.11■□□□□ 0.33
CPNE1-220ENST00000458038 POLR2IP36954 125 aaKnown RBP17.11■□□□□ 0.33
CPNE1-220ENST00000458038 SCN1BQ07699 218 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 C9orf152Q5JTZ5 239 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 Q6P435 159 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 AMIGO2Q86SJ2 522 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 LINC00482Q8N8I6 264 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 OR13C3Q8NGS6 347 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 BCAS4Q8TDM0 211 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 RFT1Q96AA3 541 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 RPEQ96AT9 228 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 MRPL48Q96GC5 212 aaKnown RBP17.11■□□□□ 0.33
CPNE1-220ENST00000458038 COQ2Q96H96 371 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 RIBC2Q9H4K1 309 aa17.11■□□□□ 0.33
CPNE1-220ENST00000458038 DAPL1A0PJW8 107 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 FAM172BPA6NC97 362 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 SLC33A1O00400 549 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-220ENST00000458038 SLC16A6O15403 523 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 GDNFP39905 211 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 OR3A4PP47883 348 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 KRTAP10-11P60412 298 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 SLC25A30Q5SVS4 291 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 OR5D14Q8NGL3 314 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 CHPT1Q8WUD6 406 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 CENPNQ96H22 339 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-220ENST00000458038 HRASLS5Q96KN8 279 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 IMPAD1Q9NX62 359 aa17.1■□□□□ 0.33
CPNE1-220ENST00000458038 WI2-2373I1.2A0A1W2PRP0 233 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 C21orf33P30042 268 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-220ENST00000458038 RASSF2P50749 326 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 NANOS3P60323 173 aaKnown RBP17.09■□□□□ 0.33
CPNE1-220ENST00000458038 BNIP1Q12981 228 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 RBM39Q14498 530 aaKnown RBP17.09■□□□□ 0.33
CPNE1-220ENST00000458038 C17orf58Q2M2W7 97 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 MEDAGQ5VYS4 303 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 COMMD1Q8N668 190 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 OR51T1Q8NGJ9 327 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 OR13C9Q8NGT0 318 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 TOMM40LQ969M1 308 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 ZCCHC4Q9H5U6 513 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 ZFP57Q9NU63 452 aa17.09■□□□□ 0.33
CPNE1-220ENST00000458038 SNTNA6NMZ2 147 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 J3QRE1 110 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms