RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 C17orf105B2RV13 164 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 H0YGG7 62 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TRAPPC6AO75865 159 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 CSTAP01040 98 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GUSBP08236 651 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 CDAP32320 146 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FAUP35544 74 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GNALP38405 381 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ARF3P61204 181 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC35A1P78382 337 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TAF9Q16594 264 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 Q7L0L9 218 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TCF24Q7RTU0 167 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TCEAL8Q8IYN2 117 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM89BQ8N5H3 189 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 STPG3Q8N7X2 389 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ELSPBP1Q96BH3 223 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 CCDC74BQ96LY2 380 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 NKX2-6A6NCS4 301 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 JTBO76095 146 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR75O95800 540 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 NAPSAO96009 420 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 HPNP05981 417 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 HIST1H1DP16402 221 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TBPP20226 339 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 RHEBQ15382 184 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SPATA12Q7Z6I5 190 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF227Q86WZ6 799 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF573Q86YE8 665 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 CDRT4Q8N9R6 151 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 KCNG3Q8TAE7 436 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF721Q8TF20 911 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TOMM40LQ969M1 308 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 RBKSQ9H477 322 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SETXQ7Z333 2677 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 IGKV1-6A0A0C4DH72 117 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 MS4A18H0YCH9 400 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 H3BMH7 237 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 M0QZ92 97 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 IL3RAP26951 378 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 UBE2KP61086 200 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 DPTQ07507 201 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GPM6BQ13491 265 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ARHGAP19Q14CB8 494 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 TRIP6Q15654 476 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 MS4A18Q3C1V0 323 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR157Q5UAW9 335 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FAHD2BQ6P2I3 314 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 ERN2Q76MJ5 926 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 OR1P1Q8NH06 330 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 OR51E1Q8TCB6 317 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 FAHD2AQ96GK7 314 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 LYZL4Q96KX0 146 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PRRT1Q99946 306 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 PECRQ9BY49 303 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 METTL8Q9H825 291 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 SDF2L1Q9HCN8 221 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 LRFN1Q9P244 771 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 IL36RNQ9UBH0 155 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 GPR34Q9UPC5 381 aa3.91□□□□□ -1.78
DEPDC1-202ENST00000456315 USP24Q9UPU5 2620 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 PRSS47A8MTI9 375 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 VWC2LB2RUY7 222 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 SAP30O75446 220 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 GIMD1P0DJR0 217 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 GNRHRP30968 328 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 POLR2LP62875 67 aaKnown RBP3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF141Q15928 474 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM69BQ5VUD6 431 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 GLIPR1L1Q6UWM5 242 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 LCN15Q6UWW0 184 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 CENPVQ7Z7K6 275 aaPredicted RBP3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 OR4F17Q8NGA8 305 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 IL22RA2Q969J5 263 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 RCHY1Q96PM5 261 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 UHRF2Q96PU4 802 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 OR4F4Q96R69 305 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 CABLES2Q9BTV7 478 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 LAMP3Q9UQV4 416 aa3.9□□□□□ -1.78
DEPDC1-202ENST00000456315 RAB11AP62491 216 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 LBHQ53QV2 105 aaPredicted RBP3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 TPGS2Q68CL5 300 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ETFRF1Q6IPR1 90 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 KIR3DL3Q8N743 410 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 OR52N5Q8NH56 324 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 LIPHQ8WWY8 451 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 OR1E3Q8WZA6 343 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 CENPMQ9NSP4 180 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 KIAA1456Q9P272 454 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ITPR3Q14573 2671 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ABCA2Q9BZC7 2435 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 A0A1W2PPQ1 181 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 A6NCN8 305 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 AHRRA9YTQ3 701 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 SIAH2O43255 324 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 IGKV1-39P01597 117 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 IGKV1D-39P04432 117 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 BLKP51451 505 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 EWSR1Q01844 656 aaKnown RBP eCLIP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms