RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 ISL1P61371 349 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 DGCR2P98153 550 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 AESQ08117 197 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 PDZK1IP1Q13113 114 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 KPNB1Q14974 876 aaKnown RBP14.76□□□□□ -0.05
MSH6-206ENST00000455383 UNQ9370/PRO34162Q6UXP9 181 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 UTS2BQ765I0 119 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 GID4Q8IVV7 300 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 CHPT1Q8WUD6 406 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 RNF166Q96A37 237 aaPredicted RBP14.76□□□□□ -0.05
MSH6-206ENST00000455383 ADAT3Q96EY9 351 aaPredicted RBP14.76□□□□□ -0.05
MSH6-206ENST00000455383 TBX5Q99593 518 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 ADI1Q9BV57 179 aa14.76□□□□□ -0.05
MSH6-206ENST00000455383 EXOSC4Q9NPD3 245 aaKnown RBP14.76□□□□□ -0.05
MSH6-206ENST00000455383 LSM4Q9Y4Z0 139 aaKnown RBP14.76□□□□□ -0.05
MSH6-206ENST00000455383 LOC107986453A0A1B0GWG9 222 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 TCRBV3S1A0A5B6 114 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 ZAR1LA6NP61 321 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 KDM4BO94953 1096 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 OR2T7P0C7T2 308 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 ATF1P18846 271 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 PRKACBP22694 351 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 EPHA2P29317 976 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 PTGFRP43088 359 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 MTCP1P56278 107 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 C5orf56Q8N8D9 126 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 NOL4LQ96MY1 436 aaPredicted RBP14.75□□□□□ -0.05
MSH6-206ENST00000455383 THTPAQ9BU02 230 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 PCDHB16Q9NRJ7 776 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 WARS2Q9UGM6 360 aaKnown RBP14.75□□□□□ -0.05
MSH6-206ENST00000455383 GSTK1Q9Y2Q3 226 aa14.75□□□□□ -0.05
MSH6-206ENST00000455383 ZNF729A6NN14 1252 aaPredicted RBP14.74□□□□□ -0.05
MSH6-206ENST00000455383 RAMP3O60896 148 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 MITFO75030 526 aaPredicted RBP14.74□□□□□ -0.05
MSH6-206ENST00000455383 UBCP0CG48 685 aaKnown RBP14.74□□□□□ -0.05
MSH6-206ENST00000455383 CGB3P0DN86 165 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 CGB7P0DN87 165 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 KIR3DL2P43630 455 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 GYS2P54840 703 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 NKAPLQ5M9Q1 402 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 Q6P435 159 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 LHFPL2Q6ZUX7 228 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 RDH10Q8IZV5 341 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 COMMD1Q8N668 190 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 OR4D6Q8NGJ1 314 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 OR9G1Q8NH87 305 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 UTP4Q969X6 686 aaKnown RBP14.74□□□□□ -0.05
MSH6-206ENST00000455383 IL4I1Q96RQ9 567 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 RHOFQ9HBH0 211 aa14.74□□□□□ -0.05
MSH6-206ENST00000455383 FGF16O43320 207 aa14.73□□□□□ -0.05
MSH6-206ENST00000455383 SNRNP70P08621 437 aaKnown RBP14.73□□□□□ -0.05
MSH6-206ENST00000455383 KRBOX4Q5JUW0 171 aa14.73□□□□□ -0.05
MSH6-206ENST00000455383 CHST4Q8NCG5 386 aa14.73□□□□□ -0.05
MSH6-206ENST00000455383 KLHL30-AS1Q8NEE0 82 aa14.73□□□□□ -0.05
MSH6-206ENST00000455383 SPSB1Q96BD6 273 aa14.73□□□□□ -0.05
MSH6-206ENST00000455383 KIRREL1Q96J84 757 aa14.73□□□□□ -0.05
MSH6-206ENST00000455383 KBTBD11-OT1A0A1B0GTJ5 212 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 A0A1W2PPI3 338 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 SLC33A1O00400 549 aaPredicted RBP14.72□□□□□ -0.05
MSH6-206ENST00000455383 FAM107AO95990 144 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 IGHG2P01859 326 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 HTR1FP30939 366 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 GP2P55259 537 aaKnown RBP14.72□□□□□ -0.05
MSH6-206ENST00000455383 RBM39Q14498 530 aaKnown RBP14.72□□□□□ -0.05
MSH6-206ENST00000455383 SPATA24Q86W54 205 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 ZNF695Q8IW36 515 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 OR56B4Q8NH76 319 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 TFAP2CQ92754 450 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 TOMM40LQ969M1 308 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 RPEQ96AT9 228 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 OPALINQ96PE5 141 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 MBOAT4Q96T53 435 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 LINC00574Q9H8X3 128 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 OR6C3Q9NZP0 311 aa14.72□□□□□ -0.05
MSH6-206ENST00000455383 SERPINE3A8MV23 424 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 NUDT19A8MXV4 375 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 C3orf84H3BNL1 204 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 J3QR06 171 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 ZFPL1O95159 310 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 MT-ND2P03891 347 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 ISG15P05161 165 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 ZNF85Q03923 595 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 FLOT2Q14254 428 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 TMEM244Q5VVB8 128 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 SAXO1Q8IYX7 474 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 DRAM1Q8N682 238 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 FGGYQ96C11 551 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 RAX2Q96IS3 184 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 PPIL3Q9H2H8 161 aaKnown RBP14.71□□□□□ -0.05
MSH6-206ENST00000455383 NCOR1P1Q9H4R4 102 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 KRT84Q9NSB2 600 aa14.71□□□□□ -0.05
MSH6-206ENST00000455383 AMMECR1Q9Y4X0 333 aaPredicted RBP14.71□□□□□ -0.05
MSH6-206ENST00000455383 CCL24O00175 119 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 APOL3O95236 402 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 ZNF44P15621 663 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 TMEM11P17152 192 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 NFYBP25208 207 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 SLC35B1P78383 322 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 DIAPH2-AS1Q14236 149 aa14.7□□□□□ -0.06
MSH6-206ENST00000455383 CDK5R1Q15078 307 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms