RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ZNF19P17023 458 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 ZNF20P17024 532 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 PRKACBP22694 351 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 KRTAP10-11P60412 298 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 CDC42P60953 191 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 ALKBH1Q13686 389 aaKnown RBP12.76□□□□□ -0.37
GPC1-206ENST00000455111 ATXN7L3Q14CW9 347 aaPredicted RBP12.76□□□□□ -0.37
GPC1-206ENST00000455111 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 LHFPL3Q86UP9 236 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 TRUB1Q8WWH5 349 aaKnown RBP12.76□□□□□ -0.37
GPC1-206ENST00000455111 RFKQ969G6 155 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 RBM14Q96PK6 669 aaKnown RBP12.76□□□□□ -0.37
GPC1-206ENST00000455111 OR4F4Q96R69 305 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 TAS2R3Q9NYW6 316 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A18PA6NE21 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A16PA6NEW6 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A20PA6NIJ5 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A9PA6NNJ1 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A12PA8MX19 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A5PA8MXJ8 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 SH2D1BO14796 132 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 XPNPEP2O43895 674 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 ZFPL1O95159 310 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A15PP0C7V4 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A13PP0C7W8 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A14PP0C7W9 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 FAM90A24PP0C7X0 464 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 ETV3LQ6ZN32 361 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 CCDC121Q6ZUS5 278 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 KCTD20Q7Z5Y7 419 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 OR13A1Q8NGR1 328 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 OR13C3Q8NGS6 347 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 PLPPR1Q8TBJ4 325 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 MYDGFQ969H8 173 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 KIRREL1Q96J84 757 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 CYYR1Q96J86 154 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 PDCD1LG2Q9BQ51 273 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 ZCCHC4Q9H5U6 513 aa12.75□□□□□ -0.37
GPC1-206ENST00000455111 TRGV10A0A0A0MS01 117 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 OR2F2O95006 317 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 DBTP11182 482 aaKnown RBP12.74□□□□□ -0.37
GPC1-206ENST00000455111 ZNF44P15621 663 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 LOXL3P58215 753 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 SCN1BQ07699 218 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 XAF1Q6GPH4 301 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 FAM53AQ6NSI3 398 aaPredicted RBP12.74□□□□□ -0.37
GPC1-206ENST00000455111 ZBTB49Q6ZSB9 765 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 REC114Q7Z4M0 266 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 RTN4RL2Q86UN3 420 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 SAXO1Q8IYX7 474 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 ACBD7Q8N6N7 88 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 DTX3Q8N9I9 347 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 OR51T1Q8NGJ9 327 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 APH1BQ8WW43 257 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
GPC1-206ENST00000455111 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 AMBNQ9NP70 447 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 INPP5EQ9NRR6 644 aa12.74□□□□□ -0.37
GPC1-206ENST00000455111 TRAV39A0A0B4J263 110 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 A0A1W2PPI3 338 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 LEUTXA8MZ59 168 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 GABRPO00591 440 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 ALDH3A2P51648 485 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 GTF2A1P52655 376 aaPredicted RBP12.73□□□□□ -0.37
GPC1-206ENST00000455111 GALEQ14376 348 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 KISS1Q15726 138 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 KRBOX4Q5JUW0 171 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 LPCAT4Q643R3 524 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 C16orf82Q7Z2V1 217 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 ZNF596Q8TC21 504 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 SGCDQ92629 289 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 GAL3ST2Q9H3Q3 398 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 IMPAD1Q9NX62 359 aa12.73□□□□□ -0.37
GPC1-206ENST00000455111 WI2-2373I1.2A0A1W2PRP0 233 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
GPC1-206ENST00000455111 HSPB6O14558 160 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 ALX3O95076 343 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 CYB5AP00167 134 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 PTGFRP43088 359 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 OR3A4PP47883 348 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 KPNB1Q14974 876 aaKnown RBP12.72□□□□□ -0.37
GPC1-206ENST00000455111 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 ARSJQ5FYB0 599 aaPredicted RBP12.72□□□□□ -0.37
GPC1-206ENST00000455111 ZNF691Q5VV52 312 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 RSBN1Q5VWQ0 802 aaPredicted RBP12.72□□□□□ -0.37
GPC1-206ENST00000455111 MEDAGQ5VYS4 303 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms