RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SLC33A1O00400 549 aaPredicted RBP9.17□□□□□ -0.94
SCN9A-205ENST00000454569 MFNGO00587 321 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 SSX5O60225 188 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 HAND1O96004 215 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 GYPAP02724 150 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 CPT2P23786 658 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 INPP1P49441 399 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 IKZF1Q13422 519 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 ATAD3CQ5T2N8 411 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 AVPI1Q5T686 147 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 TEX36Q5VZQ5 186 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 Q8IYB0 196 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 POC5Q8NA72 575 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 SUMF2Q8NBJ7 301 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 MINDY2Q8NBR6 621 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 OR56B1Q8NGI3 324 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 OR11L1Q8NGX0 322 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 ANGPTL6Q8NI99 470 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 CHPT1Q8WUD6 406 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 NUDCD2Q8WVJ2 157 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 NEU4Q8WWR8 484 aaPredicted RBP9.17□□□□□ -0.94
SCN9A-205ENST00000454569 ST8SIA4Q92187 359 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 DIABLOQ9NR28 239 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 MAB21L2Q9Y586 359 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 MALRD1Q5VYJ5 2156 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 PPIAL4EA0A075B759 164 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 OOEPA6NGQ2 149 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PPIAL4DF5H284 164 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 LCE2BO14633 110 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 DEGS1O15121 323 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 FBXO24O75426 580 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 KNG1P01042 644 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CHRM2P08172 466 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PPIAL4FP0DN26 164 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 ZNF44P15621 663 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 HIST1H1DP16402 221 aaKnown RBP9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PRDX2P32119 198 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 GABRA2P47869 451 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 EFNA4P52798 201 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 COL10A1Q03692 680 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 IL13RA2Q14627 380 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 HFEQ30201 348 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 STUMQ69YW2 141 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 RAB12Q6IQ22 244 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 C17orf107Q6ZR85 190 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CENPSQ8N2Z9 138 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 ZNF525Q8N782 197 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 ZNRF1Q8ND25 227 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 OR4S1Q8NGB4 309 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 OR52I2Q8NH67 350 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PLPPR1Q8TBJ4 325 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 SETD6Q8TBK2 473 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 C15orf40Q8WUR7 153 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CCL13Q99616 98 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CHST6Q9GZX3 395 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 RHOFQ9HBH0 211 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 RASL12Q9NYN1 266 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 RCC2Q9P258 522 aaKnown RBP9.16□□□□□ -0.94
SCN9A-205ENST00000454569 DNAJB11Q9UBS4 358 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 AK3Q9UIJ7 227 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PPIAL4AQ9Y536 164 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 TRAV39A0A0B4J263 110 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 A0A1B0GVG6 124 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 MEX3AA1L020 520 aaKnown RBP9.16□□□□□ -0.94
SCN9A-205ENST00000454569 LGALS8O00214 317 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CTDSPLO15194 276 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 SSX4O60224 188 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PDCD6O75340 191 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PTTG1O95997 202 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 IGHV2-70P01814 119 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CD3GP09693 182 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 IRF2P14316 349 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 FUT3P21217 361 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 LMO1P25800 156 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 SSTR2P30874 369 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 MNDAP41218 407 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 SMIM21Q3B7S5 101 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 DNM1P46Q6ZS02 220 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 GVQW1Q8N7I0 195 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 FAM216BQ8N7L0 139 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 MAFIPQ8WZ33 124 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 GAFA1Q96PS6 74 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 TMEM246Q9BRR3 403 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 THAP7Q9BT49 309 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PPA2Q9H2U2 334 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PCDHB16Q9NRJ7 776 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PLEKHJ1Q9NW61 149 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 ING3Q9NXR8 418 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 ETAA1Q9NY74 926 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 CTSZQ9UBR2 303 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 KLK11Q9UBX7 282 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 TBC1D24Q9ULP9 559 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 NPTNQ9Y639 398 aa9.16□□□□□ -0.94
SCN9A-205ENST00000454569 PRRC2AP48634 2157 aaKnown RBP9.15□□□□□ -0.94
SCN9A-205ENST00000454569 IGKV1D-8A0A087WSZ0 117 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 LINC00854A0A1B0GVQ3 168 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A10PA6NDY2 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A18PA6NE21 464 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms