RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ATP6AP1LQ52LC2 224 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 ZNF678Q5SXM1 525 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 FAM222AQ5U5X8 452 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 FAM19A3Q7Z5A8 133 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 UBALD2Q8IYN6 164 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 OR2M3Q8NG83 312 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 OR6K3Q8NGY3 331 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 TBL1YQ9BQ87 522 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 PRSS27Q9BQR3 290 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 API5Q9BZZ5 524 aaKnown RBP2.55□□□□□ -2
HMGN3P1-201ENST00000453847 CHST5Q9GZS9 411 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 TMEM38BQ9NVV0 291 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 OPN4Q9UHM6 478 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 TP53TG1Q9Y2A0 90 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 CBY1Q9Y3M2 126 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 ZNF780BQ9Y6R6 833 aa2.55□□□□□ -2
HMGN3P1-201ENST00000453847 CLUHO75153 1309 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 CENPVL3A0A0U1RRI6 287 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 CYSRT1A8MQ03 144 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 F5H5K5 113 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 I3L4J1 428 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 PHYHO14832 338 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 COX7A2P2O60397 106 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 SCO1O75880 301 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 PSMG1O95456 288 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 CYB5R3P00387 301 aaPredicted RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 MAS1P04201 325 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 HIST1H1CP16403 213 aaKnown RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 PSMB9P28065 219 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 ITGB3BPQ13352 177 aaPredicted RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 SLC36A2Q495M3 483 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 FAM19A5Q7Z5A7 132 aaPredicted RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 DNAAF3Q8N9W5 541 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 OR2Z1Q8NG97 314 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 PPWD1Q96BP3 646 aaKnown RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 L3HYPDHQ96EM0 354 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 ZNF285Q96NJ3 590 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 GPR82Q96P67 336 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 OLFM3Q96PB7 478 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 EBPLQ9BY08 206 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 UGT2B28Q9BY64 529 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 ZSCAN16Q9H4T2 348 aaPredicted RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 UCK1Q9HA47 277 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 FBXO6Q9NRD1 293 aaPredicted RBP2.54□□□□□ -2
HMGN3P1-201ENST00000453847 COMMD9Q9P000 198 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 SVILO95425 2214 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 TUBGCP6Q96RT7 1819 aa2.54□□□□□ -2
HMGN3P1-201ENST00000453847 ARAP3Q8WWN8 1544 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 RPRD2Q5VT52 1461 aaKnown RBP2.53□□□□□ -2
HMGN3P1-201ENST00000453847 A8MWL6 223 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 TCF21O43680 179 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 VAMP5O95183 116 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 AHSA1O95433 338 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 LHBP01229 141 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 SOD3P08294 240 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 PRTN3P24158 256 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 KRTAP10-6P60371 365 aaPredicted RBP2.53□□□□□ -2
HMGN3P1-201ENST00000453847 MLLT11Q13015 90 aaPredicted RBP2.53□□□□□ -2
HMGN3P1-201ENST00000453847 HLA-DRB5Q30154 266 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 KLHL12Q53G59 568 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 SLC25A45Q8N413 288 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 ZDHHC22Q8N966 263 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 OR52N1Q8NH53 320 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 CASTOR1Q8WTX7 329 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 FRZBQ92765 325 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 SMIM19Q96E16 107 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 RBP7Q96R05 134 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 VCXQ9H320 206 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 ENOPH1Q9UHY7 261 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 ATRXP46100 2492 aa2.53□□□□□ -2
HMGN3P1-201ENST00000453847 TICRRQ7Z2Z1 1910 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 CHD2O14647 1828 aaKnown RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 F5H5T6 163 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 TMEM250H0YL14 139 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 CCRL2O00421 344 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 ISLRO14498 428 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 SLC37A4O43826 429 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 CRTAPO75718 401 aaPredicted RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 DEXIO95424 95 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 MRPL3P09001 348 aaKnown RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 MUC1P15941 1255 aaPredicted RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 UGT2B7P16662 529 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 IL1RNP18510 177 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 ATP5G2Q06055 141 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 MGAT3Q09327 533 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 ZNF816Q0VGE8 651 aaPredicted RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 TMEM241Q24JQ0 296 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 UBE2NLQ5JXB2 153 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 AP1ARQ63HQ0 302 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 DNM1P34Q6PK57 102 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 FA2HQ7L5A8 372 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 STOML3Q8TAV4 291 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 ITLN2Q8WWU7 325 aaPredicted RBP2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 MAL2Q969L2 176 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 PPCDCQ96CD2 204 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 CMTM5Q96DZ9 223 aa2.52□□□□□ -2.01
HMGN3P1-201ENST00000453847 THTPAQ9BU02 230 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms