RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ATP6V1E1P36543 226 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 KIR3DL2P43630 455 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 PDZK1IP1Q13113 114 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 DCTN2Q13561 401 aaKnown RBP8.67□□□□□ -1.02
USP1-204ENST00000452143 KHDC1LQ5JSQ8 128 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 TPTE2P1Q5T6R2 138 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 LINC00482Q8N8I6 264 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 OR51D1Q8NGF3 324 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 OR4D6Q8NGJ1 314 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 OR8J1Q8NGP2 316 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 ADAT3Q96EY9 351 aaPredicted RBP8.67□□□□□ -1.02
USP1-204ENST00000452143 MBOAT4Q96T53 435 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 GABARAPL3Q9BY60 117 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 ZNF286AQ9HBT8 521 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 INPP5EQ9NRR6 644 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 GNG8Q9UK08 70 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 HHLA2Q9UM44 414 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 GSTK1Q9Y2Q3 226 aa8.67□□□□□ -1.02
USP1-204ENST00000452143 ODAMA1E959 279 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 ZNF729A6NN14 1252 aaPredicted RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 APOL3O95236 402 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 MT-ND2P03891 347 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 OCM2P0CE71 109 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 OCMP0CE72 109 aaPredicted RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 FAM106CPP0CH98 169 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 ATF1P18846 271 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 FASP25445 335 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 PRRX1P54821 245 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 SNU13P55769 128 aaKnown RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 AESQ08117 197 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 KPNB1Q14974 876 aaKnown RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 BAIAP2L2Q6UXY1 529 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 SAXO1Q8IYX7 474 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 OR2G2Q8NGZ5 317 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 SLC7A6OSQ96CW6 309 aaPredicted RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 CIB1Q99828 191 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 MCRIP2Q9BUT9 160 aaKnown RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 NEK6Q9HC98 313 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 OR6C3Q9NZP0 311 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 MOB4Q9Y3A3 225 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
USP1-204ENST00000452143 HSPE1-MOB4S4R3N1 261 aa8.66□□□□□ -1.02
USP1-204ENST00000452143 IGKV1-12A0A0C4DH73 117 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 WI2-2373I1.2A0A1W2PRP0 233 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 PSMB11A5LHX3 300 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 FAM172BPA6NC97 362 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 LY6LH3BQJ8 138 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 IGKV1D-12P01611 117 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 FCGR1AP12314 374 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 ZNF44P15621 663 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 GDNFP39905 211 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 GLIPR1P48060 266 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 CCR9P51686 369 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 KRTAP10-11P60412 298 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 ZNF85Q03923 595 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 TP53I3Q53FA7 332 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 KRBOX4Q5JUW0 171 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 C11orf87Q6NUJ2 197 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 KCTD20Q7Z5Y7 419 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 THNSL2Q86YJ6 484 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 RDH10Q8IZV5 341 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 BCAS4Q8TDM0 211 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 EME1Q96AY2 570 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 FGGYQ96C11 551 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 B9D2Q9BPU9 175 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 FRRS1LQ9P0K9 344 aa8.65□□□□□ -1.02
USP1-204ENST00000452143 KBTBD11-OT1A0A1B0GTJ5 212 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A18PA6NE21 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A16PA6NEW6 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A20PA6NIJ5 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A9PA6NNJ1 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A12PA8MX19 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A5PA8MXJ8 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 SLC33A1O00400 549 aaPredicted RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 SLC16A6O15403 523 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FGF16O43320 207 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A15PP0C7V4 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A13PP0C7W8 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A14PP0C7W9 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 FAM90A24PP0C7X0 464 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 CALCBP10092 127 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 OR3A4PP47883 348 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 THBS3P49746 956 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 RPL23AP62750 156 aaKnown RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 PAX5Q02548 391 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 CD69Q07108 199 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 RBM39Q14498 530 aaKnown RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 ATXN7L3Q14CW9 347 aaPredicted RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 C10orf99Q6UWK7 81 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 ETV3LQ6ZN32 361 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 OR5D18Q8NGL1 313 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 OR13C9Q8NGT0 318 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 CHPT1Q8WUD6 406 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 TRUB1Q8WWH5 349 aaKnown RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 TOMM40LQ969M1 308 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 RFT1Q96AA3 541 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms