RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HABP2Q14520 560 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-208ENST00000452047 PDLIM3Q53GG5 364 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-208ENST00000452047 PRAMEF5Q5TYX0 476 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 ZNF691Q5VV52 312 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 HEPN1Q6WQI6 88 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 Q6ZTK2 550 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 CHST4Q8NCG5 386 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 OR51A2Q8NGJ7 313 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 TSEN15Q8WW01 171 aaKnown RBP10.04□□□□□ -0.8
CPSF4-208ENST00000452047 NKX3-1Q99801 234 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-208ENST00000452047 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 ABCB10Q9NRK6 738 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 TAS2R3Q9NYW6 316 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 PCDHGB5Q9Y5G0 923 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 HILPDAQ9Y5L2 63 aa10.04□□□□□ -0.8
CPSF4-208ENST00000452047 TRGV10A0A0A0MS01 117 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 ODAMA1E959 279 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 FUOMA2VDF0 154 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 FAM90A22PA8MWA6 464 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 BAG2O95816 211 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 CLIC3O95833 236 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 TMEM225BP0DP42 221 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 CDK2P24941 298 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 CD34P28906 385 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 GDNFP39905 211 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 MTNR1BP49286 362 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 ETV1P50549 477 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 CCDC58Q4VC31 144 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 OR2G6Q5TZ20 316 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 HIST2H2BDQ6DRA6 164 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 ELP2Q6IA86 826 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 DTX3Q8N9I9 347 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 ZNF555Q8NEP9 628 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 PXT1Q8NFP0 134 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 OR51T1Q8NGJ9 327 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 NDNFQ8TB73 568 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 CNIH3Q8TBE1 160 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-208ENST00000452047 PPIL3Q9H2H8 161 aaKnown RBP10.03□□□□□ -0.8
CPSF4-208ENST00000452047 PITPNC1Q9UKF7 332 aa10.03□□□□□ -0.8
CPSF4-208ENST00000452047 ANKRD65E5RJM6 399 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 F2RL2O00254 374 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 GABRPO00591 440 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 CSF1P09603 554 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 VSIG10L2P0DP72 767 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 RAB3AP20336 220 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 DCKP27707 260 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 HTR1DP28221 377 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 SOX2P48431 317 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 BDH1Q02338 343 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 SLC34A1Q06495 639 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 SCN1BQ07699 218 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 ATXN7L3Q14CW9 347 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-208ENST00000452047 KRBOX4Q5JUW0 171 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 OR52W1Q6IF63 320 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 RPL22L1Q6P5R6 122 aaKnown RBP10.02□□□□□ -0.81
CPSF4-208ENST00000452047 RTN4RL2Q86UN3 420 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 ABHD12Q8N2K0 398 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 C11orf44Q8N8P7 122 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 Q8NFD4 153 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 FAM110DQ8TAY7 271 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-208ENST00000452047 GPR148Q8TDV2 347 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 TMEM106AQ96A25 262 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 CPNE2Q96FN4 548 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-208ENST00000452047 TAS2R4Q9NYW5 299 aa10.02□□□□□ -0.81
CPSF4-208ENST00000452047 SIRT4Q9Y6E7 314 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-208ENST00000452047 A0A087X0M5 115 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 TRAV24A0A0B4J272 114 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 A0A1B0GX30 115 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 FAM172BPA6NC97 362 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 H0YJX3 145 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 DEGS1O15121 323 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 LALBAP00709 142 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 CGB3P0DN86 165 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 CGB7P0DN87 165 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 PTGFRP43088 359 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 PAX5Q02548 391 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 C17orf58Q2M2W7 97 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 UTF1Q5T230 341 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 ASCL4Q6XD76 172 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 Q6ZS46 218 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF596Q8TC21 504 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 TNFAIP8L1Q8WVP5 186 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 STMN2Q93045 179 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 SMIM19Q96E16 107 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 PRSS22Q9GZN4 317 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF286AQ9HBT8 521 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 DPM3Q9P2X0 92 aa10.01□□□□□ -0.81
CPSF4-208ENST00000452047 DIMT1Q9UNQ2 313 aaKnown RBP10.01□□□□□ -0.81
CPSF4-208ENST00000452047 PLXNB1O43157 2135 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 IRGMA1A4Y4 181 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF729A6NN14 1252 aaPredicted RBP10□□□□□ -0.81
CPSF4-208ENST00000452047 HSPB6O14558 160 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 OGG1O15527 345 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 ALDOBP05062 364 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 CD2P06729 351 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 OR3A4PP47883 348 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 BLCAPP62952 87 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms