RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TMEM17Q86X19 198 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 IL22RA1Q8N6P7 574 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 OR5AP2Q8NGF4 316 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 OR6K3Q8NGY3 331 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ADAMTS17Q8TE56 1095 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 C10orf35Q96D05 121 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 FAHD2AQ96GK7 314 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 PRRG4Q9BZD6 226 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 MRPS18CQ9Y3D5 142 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SHANK1Q9Y566 2161 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SERPINE3A8MV23 424 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 C21orf140B9A014 251 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 FARS2O95363 451 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 HIST1H1BP16401 226 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 S100A7P31151 101 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ACTBL2Q562R1 376 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 PLCXD3Q63HM9 321 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 JMJD6Q6NYC1 403 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 RPUSD3Q6P087 351 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 LHFPL1Q86WI0 220 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SPSB1Q96BD6 273 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 BCO1Q9HAY6 547 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 B4GALT7Q9UBV7 327 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 OSGIN2Q9Y236 505 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ITGB1BP1O14713 200 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SCAF4O95104 1147 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 AGTR1P30556 359 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SRSF4Q08170 494 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 KRTAP27-1Q3LI81 207 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 Q5PR19 223 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 FBXL14Q8N1E6 418 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ZSCAN4Q8NAM6 433 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ASB13Q8WXK3 278 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 EMG1Q92979 244 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 CDC6Q99741 560 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SULT4A1Q9BR01 284 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF471Q9BX82 626 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ACKR4Q9NPB9 350 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 CRIM1Q9NZV1 1036 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 AK3Q9UIJ7 227 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 PGAM2P15259 253 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 HLA-GP17693 338 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 FPR2P25090 351 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 TAS2R31P59538 309 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 TAS2R46P59540 309 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 PCBD1P61457 104 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 GAMTQ14353 236 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 CNN3Q15417 329 aaKnown RBP10.43□□□□□ -0.74
COL27A1-202ENST00000451716 UNQ6126/PRO20091Q6UXV3 157 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 CALHM1Q8IU99 346 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 NEK7Q8TDX7 302 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF2Q9BSG1 426 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-202ENST00000451716 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■□□□□ 8.9
COL27A1-202ENST00000451716 ZNF629Q9UEG4 869 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-202ENST00000451716 LIPGQ9Y5X9 500 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 C5orf49A4QMS7 147 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF850A8MQ14 1090 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 EREGO14944 169 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 SFT2D2O95562 160 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF708P17019 499 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 WNT5AP41221 380 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 SPEM2Q0P670 501 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 KCNRGQ8N5I3 272 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 LIME1Q9H400 295 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 ABI3Q9P2A4 366 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 CSAG2Q9Y5P2 127 aa10.43□□□□□ -0.74
COL27A1-202ENST00000451716 ZFHX2Q9C0A1 2572 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 KANTRA0A1W2PQU2 76 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 SNAPC5O75971 98 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 IGHV2-5P01817 119 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 HOXB5P09067 269 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 CD79AP11912 226 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 SLC25A4P12235 298 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 FOLR2P14207 255 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF14P17017 642 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 MEOX1P50221 254 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 SOX8P57073 446 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 EIF3IQ13347 325 aaKnown RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 PEG10Q86TG7 708 aaKnown RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 VASH2Q86V25 355 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 FOXRED2Q8IWF2 684 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM185AQ8NFB2 350 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 OR10AD1Q8NGE0 317 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 OR5M9Q8NGP3 310 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 OR51F2Q8NH61 342 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 OR10C1Q96KK4 312 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 DEFB127Q9H1M4 99 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 IGKV3D-15A0A087WSY6 115 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 A0A0D9SG52 128 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 SYNGR4O95473 234 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 PSMB6P28072 239 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 NPBWR2P48146 333 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 AIMP2Q13155 320 aaKnown RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM42Q69YG0 159 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 TMPRSS7Q7RTY8 843 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 DCUN1D4Q92564 292 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms