RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ANKRD34AQ69YU3 496 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM72DQ6L9T8 149 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 C22orf39Q6P5X5 142 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TEX38Q6PEX7 206 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 PSRC1Q6PGN9 363 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 UNQ9370/PRO34162Q6UXP9 181 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM57BQ71RH2 274 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SYT9Q86SS6 491 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LINC00596Q86U02 117 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LINC01551Q86U37 167 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM72BQ86X60 149 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CMTM8Q8IZV2 173 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 C10orf126Q8N4M7 172 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 OR2M3Q8NG83 312 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RNF133Q8WVZ7 376 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CHCHD1Q96BP2 118 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 CTHRC1Q96CG8 243 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MMABQ96EY8 250 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 DUSP23Q9BVJ7 150 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MED20Q9H944 212 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SDF2L1Q9HCN8 221 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC52A3Q9NQ40 469 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 YAE1D1Q9NRH1 226 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.96□□□□□ -2.1
USP53-202ENST00000450251 WBP1LQ9NX94 342 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CLEC5AQ9NY25 188 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CLDND1Q9NY35 253 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SERTAD3Q9UJW9 196 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF236Q9UL36 1845 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TRBV23OR9-2A0A075B6M9 112 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TRAV14DV4A0A0A6YYC5 116 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TRAV38-1A0A0B4J264 116 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TRBV5-5A0A0J9YX44 114 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C3orf85A0A1B0GTC6 90 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PSMB11A5LHX3 300 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IQCF5A8MTL0 148 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CHST1O43916 411 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MPZL1O95297 269 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CNIH1O95406 144 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CA1P00915 261 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 IGHG1P01857 330 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 F11P03951 625 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ADH4P08319 380 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FCGR3AP08637 254 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IRF2P14316 349 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FAHP16930 419 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ATP6V0CP27449 155 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 DYNLT3P51808 116 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 RND3P61587 244 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NTHL1P78549 312 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C5orf47Q569G3 176 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 VHLLQ6RSH7 139 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TMEM207Q6UWW9 146 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MED25Q71SY5 747 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TMEM144Q7Z5S9 345 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 BCDIN3DQ7Z5W3 292 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 LHFPL4Q7Z7J7 247 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 BATF2Q8N1L9 274 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZNF664Q8N3J9 261 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FADS6Q8N9I5 356 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 GATSQ8NAP1 163 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SCCPDHQ8NBX0 429 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR10G3Q8NGC4 313 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR10G9Q8NGN4 311 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR10G7Q8NGN6 311 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR2A1Q8NGT9 310 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR4X1Q8NH49 305 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CD99L2Q8TCZ2 262 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NANOS1Q8WY41 292 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 PP6455Q8WZ26 134 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TMEM45BQ96B21 275 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 DNAJA3Q96EY1 480 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SLC35A4Q96G79 324 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 JSRP1Q96MG2 331 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 CDX2Q99626 313 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 NUDT22Q9BRQ3 303 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C16orf70Q9BSU1 422 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NRSN2Q9GZP1 204 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 HAPLN2Q9GZV7 340 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZNF160Q9HCG1 818 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FCF1Q9Y324 198 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 MRPS18CQ9Y3D5 142 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 CACNA1AO00555 2505 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 A0A0U1RQF3 1178 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IGSF23A1L1A6 192 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TMEM189A5PLL7 270 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 AHRRA9YTQ3 701 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR11H12B2RN74 326 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 H3BNC9 293 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SOX1O00570 391 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 GJB5O95377 273 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NID1P14543 1247 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 THPOP40225 353 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 LHX2P50458 406 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 RPL27P61353 136 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 SSBP2P81877 361 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 LY6KQ17RY6 165 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 LRRC75BQ2VPJ9 315 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZNF684Q5T5D7 378 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TRAT1Q6PIZ9 186 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms