RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 METAP1P53582 386 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 EGR4Q05215 589 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 DPTQ07507 201 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 RTP5Q14D33 572 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 FBLN7Q53RD9 439 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 VN1R4Q7Z5H5 301 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 ATG4DQ86TL0 474 aaPredicted RBP7.5□□□□□ -1.21
LSM5-208ENST00000450169 CLEC18CQ8NCF0 446 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 OR4B1Q8NGF8 309 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 OR4D5Q8NGN0 318 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 AGMATQ9BSE5 352 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 RAB11FIP5Q9BXF6 653 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 MAGT1Q9H0U3 335 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 LYRM2Q9NU23 88 aaPredicted RBP7.5□□□□□ -1.21
LSM5-208ENST00000450169 SLC45A2Q9UMX9 530 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 MPDZO75970 2070 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 SERINC4A6NH21 518 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 CEBPZOSA8MTT3 80 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 F6UZH7 168 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 SEMA4FO95754 770 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 CTLA4P16410 223 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 EPHA8P29322 1005 aaPredicted RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 TPPP2P59282 170 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 MGAT2Q10469 447 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 ABCA11PQ4W5N1 156 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TMEM41BQ5BJD5 291 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 C1orf185Q5T7R7 199 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TSPO2Q5TGU0 170 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TMEM215Q68D42 235 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 WBP2NLQ6ICG8 309 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 CPEB2Q7Z5Q1 589 aaKnown RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 TMEM25Q86YD3 366 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TMEM252Q8N6L7 170 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 RTN4IP1Q8WWV3 396 aaPredicted RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 ZNF845Q96IR2 970 aaPredicted RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 OR10A2Q9H208 303 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 C11orf1Q9H5F2 150 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 DECR2Q9NUI1 292 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 HSPB7Q9UBY9 170 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 WIPI2Q9Y4P8 454 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 LRRK1Q38SD2 2015 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 SNRNP200O75643 2136 aaKnown RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 IGKV1D-8A0A087WSZ0 117 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 IGHV2OR16-5A0A0B4J2B6 119 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 CCDC163A0A0D9SF12 145 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 LRRC3CA6NJW4 275 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 C11orf98E9PRG8 122 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 ONECUT2O95948 504 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 GLI4P10075 376 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 CMPK1P30085 196 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 SRP14P37108 136 aaKnown RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 DYNLT3P51808 116 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TAS2R30P59541 319 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 RPL23P62829 140 aaKnown RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 PAFAH1B2P68402 229 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 MORN2Q502X0 79 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 OGFOD3Q6PK18 319 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 Q6ZVH6 145 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TMPRSS7Q7RTY8 843 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 ZNF440Q8IYI8 595 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TMEM217Q8N7C4 229 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 C12orf76Q8N812 135 aaPredicted RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 ZNF709Q8N972 641 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 HOXB13Q92826 284 aaPredicted RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 TOMM40LQ969M1 308 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 ZNF837Q96EG3 531 aaPredicted RBP7.49□□□□□ -1.21
LSM5-208ENST00000450169 S1PR5Q9H228 398 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 MANBALQ9NQG1 85 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 UQCR10Q9UDW1 63 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 RNF24Q9Y225 148 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 TRAPPC1Q9Y5R8 145 aa7.49□□□□□ -1.21
LSM5-208ENST00000450169 PROB1E7EW31 1015 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 CST7O76096 145 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 KBTBD11O94819 623 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 MPZL1O95297 269 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 CDS2O95674 445 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 GPR75O95800 540 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 TTRP02766 147 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 PEBP1P30086 187 aaKnown RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 RPL15P61313 204 aaKnown RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 LCN2P80188 198 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 MRPS34P82930 218 aaKnown RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 OCIAD2Q56VL3 154 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 LDLRAD2Q5SZI1 272 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 KCNIP4Q6PIL6 250 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 UNQ5815/PRO19632Q6UWF5 114 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 LCN15Q6UWW0 184 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 Q6ZN92 141 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 CALHM1Q8IU99 346 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 OR51T1Q8NGJ9 327 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 OR4C3Q8NH37 302 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 APH1AQ96BI3 265 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 CTHRC1Q96CG8 243 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 RNF2Q99496 336 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 TXN2Q99757 166 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 HSPB9Q9BQS6 159 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 FOXQ1Q9C009 403 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 B3GALT1Q9Y5Z6 326 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms