RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MEGF10Q96KG7 1140 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 OR2V2Q96R30 315 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 RANGRFQ9HD47 186 aaPredicted RBP12.04□□□□□ -0.48
USP39-207ENST00000450066 NECAP2Q9NVZ3 263 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 ING3Q9NXR8 418 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 ETAA1Q9NY74 926 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 VSIG4Q9Y279 399 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 hCG_1807616A0A1W2PRN6 198 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 VSTM5A8MXK1 200 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 HSPB6O14558 160 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 SPRY3O43610 288 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 OR2H2O95918 312 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 OR4A8P0C604 315 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 GRNP28799 593 aaKnown RBP12.04□□□□□ -0.48
USP39-207ENST00000450066 ACP7Q6ZNF0 438 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 TMED4Q7Z7H5 227 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 PLPPR2Q96GM1 343 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 WDR13Q9H1Z4 485 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 RASL12Q9NYN1 266 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 TREM2Q9NZC2 230 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 ZNF69Q9UC07 566 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 GLS2Q9UI32 602 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 TRBV6-6A0A0A6YYG2 114 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 SLC33A1O00400 549 aaPredicted RBP12.03□□□□□ -0.48
USP39-207ENST00000450066 WNT9BO14905 357 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 OR4E1P0C645 316 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 OR5H8P0DN80 308 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 GLRA1P23415 457 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 GATA4P43694 442 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 EIF2B2P49770 351 aaKnown RBP12.03□□□□□ -0.48
USP39-207ENST00000450066 SMIM21Q3B7S5 101 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 C4orf46Q504U0 113 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 AADACL3Q5VUY0 350 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 SHEQ5VZ18 495 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 SLC25A42Q86VD7 318 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 TCTE3Q8IZS6 198 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 GALNT11Q8NCW6 608 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 OR11H7Q8NGC8 314 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 LINC01560Q8TB33 94 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 PRR7Q8TB68 274 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 FN3KRPQ9HA64 309 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 Q9N2K0 584 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 IL19Q9UHD0 177 aa12.03□□□□□ -0.48
USP39-207ENST00000450066 POM121CA8CG34 1229 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 HAND1O96004 215 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 KNG1P01042 644 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 IGHV1-46P01743 117 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 TNFSF4P23510 183 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 MDH2P40926 338 aaKnown RBP12.02□□□□□ -0.48
USP39-207ENST00000450066 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.48
USP39-207ENST00000450066 PAN3Q58A45 887 aaKnown RBP12.02□□□□□ -0.48
USP39-207ENST00000450066 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 DMRTC2Q8IXT2 367 aaPredicted RBP12.02□□□□□ -0.48
USP39-207ENST00000450066 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 LRRC29Q8WV35 223 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 CAPSLQ8WWF8 208 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 SCGB3A2Q96PL1 93 aa12.02□□□□□ -0.48
USP39-207ENST00000450066 FYTTD1Q96QD9 318 aaKnown RBP12.02□□□□□ -0.48
USP39-207ENST00000450066 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.48
USP39-207ENST00000450066 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.02□□□□□ -0.49
USP39-207ENST00000450066 H7C1Q1 480 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 SIRPB1O00241 398 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 CD3EP07766 207 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 ADH4P08319 380 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 LMO1P25800 156 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 NPY4RP50391 375 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 TFF3Q07654 80 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 SURF2Q15527 256 aaPredicted RBP12.02□□□□□ -0.49
USP39-207ENST00000450066 C4orf17Q53FE4 359 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 ZNF660Q6AZW8 331 aaPredicted RBP12.02□□□□□ -0.49
USP39-207ENST00000450066 FAHD2BQ6P2I3 314 aaPredicted RBP12.02□□□□□ -0.49
USP39-207ENST00000450066 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
USP39-207ENST00000450066 OR52B4Q8NGK2 314 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 MRPL30Q8TCC3 161 aaKnown RBP12.02□□□□□ -0.49
USP39-207ENST00000450066 ITLN1Q8WWA0 313 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 FAHD2AQ96GK7 314 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 DIRC2Q96SL1 478 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 GPR132Q9UNW8 380 aa12.02□□□□□ -0.49
USP39-207ENST00000450066 TUBAL3A6NHL2 446 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 SRRM5B3KS81 715 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 CXCL3P19876 107 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 FPR2P25090 351 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 SERPINF1P36955 418 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 ECI1P42126 302 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 TNFAIP6P98066 277 aaPredicted RBP12.01□□□□□ -0.49
USP39-207ENST00000450066 SPRNQ5BIV9 151 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 C17orf107Q6ZR85 190 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 MOGAT3Q86VF5 341 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 FAM90A1Q86YD7 464 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
USP39-207ENST00000450066 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
USP39-207ENST00000450066 ZNF2Q9BSG1 426 aaPredicted RBP12.01□□□□□ -0.49
USP39-207ENST00000450066 TMEM165Q9HC07 324 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 OR14J1Q9UGF5 321 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 OR5H14A6NHG9 310 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms