RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 FAM157BP0CG42 384 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 OR3A4PP47883 348 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 GVQW1Q8N7I0 195 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 LINC00469Q8N7U9 141 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
ITGB4-202ENST00000449880 VSIG4Q9Y279 399 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 DRD3P35462 400 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 SMIM21Q3B7S5 101 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 ZNF385CQ66K41 422 aaPredicted RBP12.32□□□□□ -0.44
ITGB4-202ENST00000449880 FOXC1Q12948 553 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 PRR27Q6MZM9 219 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 EIF4E3Q8N5X7 224 aaKnown RBP12.32□□□□□ -0.44
ITGB4-202ENST00000449880 OR1L6Q8NGR2 347 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 CA5BP1Q8WTZ4 195 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 TMEM204Q9BSN7 226 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 DSPPQ9NZW4 1301 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 FSTP19883 344 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 DSCR4P56555 118 aaPredicted RBP12.31□□□□□ -0.44
ITGB4-202ENST00000449880 FOXF1Q12946 379 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
ITGB4-202ENST00000449880 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 C11orf94C9JXX5 98 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 ASCL1P50553 236 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 LINC01555Q8NAE3 123 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 OR4D11Q8NGI4 311 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TREM2Q9NZC2 230 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 CACNG5Q9UF02 275 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TDRD15B5MCY1 1934 aaKnown RBP12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TRDCB7Z8K6 153 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TNFSF11O14788 317 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 ZNF253O75346 499 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 OR2A4O95047 310 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TAS2R60P59551 318 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 YBX1P67809 324 aaKnown RBP12.31□□□□□ -0.44
ITGB4-202ENST00000449880 OR1P1Q8NH06 330 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 ADAMTS17Q8TE56 1095 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 OR2A7Q96R45 310 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 SLC25A22Q9H936 323 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 A8MXK9 166 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TTRP02766 147 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 RPS4Y1P22090 263 aaKnown RBP12.31□□□□□ -0.44
ITGB4-202ENST00000449880 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TBX15Q96SF7 602 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 P2RX4Q99571 388 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 SH2D2AQ9NP31 389 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TIMM9Q9Y5J7 89 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 SYNGR2O43760 224 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 MT-ND6P03923 174 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
ITGB4-202ENST00000449880 MMP16P51512 607 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 CCL7P80098 99 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 ROBO4Q8WZ75 1007 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 HSPB8Q9UJY1 196 aa12.31□□□□□ -0.44
ITGB4-202ENST00000449880 CTXND1A0A1B0GTU2 59 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 MOSPD3O75425 235 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 VWA1Q6PCB0 445 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 CADM4Q8NFZ8 388 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 A0A1B0GU03 582 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 BCL2P10415 239 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 HOGA1Q86XE5 327 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 OR1L4Q8NGR5 311 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 GYPAP02724 150 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 LIMS1P48059 325 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 PPOXP50336 477 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
ITGB4-202ENST00000449880 Q6ZS52 159 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 PSME4Q14997 1843 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 CFDP00746 253 aaPredicted RBP12.3□□□□□ -0.44
ITGB4-202ENST00000449880 LPAR6P43657 344 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
ITGB4-202ENST00000449880 SERF2P84101 59 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 MICBQ29980 383 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 C6orf201Q7Z4U5 140 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
ITGB4-202ENST00000449880 SLC26A1Q9H2B4 701 aa12.3□□□□□ -0.44
ITGB4-202ENST00000449880 PLPP3O14495 311 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 KLK10O43240 276 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 HOXC4P09017 264 aaPredicted RBP12.29□□□□□ -0.44
ITGB4-202ENST00000449880 FAAP24Q9BTP7 215 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 DDA1Q9BW61 102 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 MBD1Q9UIS9 605 aaPredicted RBP12.29□□□□□ -0.44
ITGB4-202ENST00000449880 KIAA0100Q14667 2235 aaKnown RBP12.29□□□□□ -0.44
ITGB4-202ENST00000449880 DCAF12L2Q5VW00 463 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 LRRC61Q9BV99 259 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 ZNF835Q9Y2P0 537 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 TRGV5A0A0B4J1U4 118 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 ANKRD34CP0C6C1 535 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 COL9A1P20849 921 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 GNG3P63215 75 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 DHRS11Q6UWP2 260 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 TBC1D26Q86UD7 250 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 ADAD2Q8NCV1 583 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms