RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CALHM2Q9HA72 323 aa14.55□□□□□ -0.08
TOM1-210ENST00000449058 FAM86C1Q9NVL1 165 aa14.55□□□□□ -0.08
TOM1-210ENST00000449058 ST8SIA3O43173 380 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 SYNGR4O95473 234 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 SEC11BP0C7V7 166 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 CCL2P13500 99 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 CCNOP22674 350 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 CLEC9AQ6UXN8 241 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 SLC35G3Q8N808 338 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 DMBX1Q8NFW5 382 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 GINS3Q9BRX5 216 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 TTTY12Q9BZ98 90 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 RNF122Q9H9V4 155 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 Q9N2K0 584 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 FAM212BQ9NTI7 297 aaPredicted RBP14.54□□□□□ -0.08
TOM1-210ENST00000449058 C3orf85A0A1B0GTC6 90 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 A0A1W2PNU3 283 aaPredicted RBP14.54□□□□□ -0.08
TOM1-210ENST00000449058 ZNF724A8MTY0 619 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 GLAP06280 429 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 SFTA3P0C7M3 94 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 GNRHRP30968 328 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 MAGEA5P43359 124 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 HAAOP46952 286 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 ID4P47928 161 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 KCNJ3P48549 501 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 GPM6AP51674 278 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 OR1C1Q15619 314 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 MRPL21Q7Z2W9 205 aaKnown RBP14.54□□□□□ -0.08
TOM1-210ENST00000449058 ZDHHC23Q8IYP9 409 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 HS3ST6Q96QI5 342 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 GPR87Q9BY21 358 aa14.54□□□□□ -0.08
TOM1-210ENST00000449058 BORCS7-ASMTA0A0B4J1R7 106 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 FAM166BA8MTA8 275 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 C9JQL5 133 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 ZNHIT1O43257 154 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 OR8U9P0C7N5 309 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 MPLP40238 635 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 DVL1P1P54792 670 aaPredicted RBP14.53□□□□□ -0.08
TOM1-210ENST00000449058 SRPXP78539 464 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 OR8U1Q8NH10 309 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 TMEM222Q9H0R3 208 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 H7C2Y5 167 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 HEXAP06865 529 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 SPP1P10451 314 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 RND3P61587 244 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 SWI5Q1ZZU3 235 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 DPPA2Q7Z7J5 298 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 USB1Q9BQ65 265 aaKnown RBP14.53□□□□□ -0.08
TOM1-210ENST00000449058 C11orf1Q9H5F2 150 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 MTCH1Q9NZJ7 389 aa14.53□□□□□ -0.08
TOM1-210ENST00000449058 C21orf140B9A014 251 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 AGPAT2O15120 278 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 NDUFA2O43678 99 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 CDS2O95674 445 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 DANCRP0C864 163 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 PVALBP20472 110 aaPredicted RBP14.52□□□□□ -0.08
TOM1-210ENST00000449058 CD80P33681 288 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 NOVA1P51513 510 aaKnown RBP14.52□□□□□ -0.08
TOM1-210ENST00000449058 MPV17LQ2QL34 196 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 TMEM251Q8N6I4 163 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 POM121L2Q96KW2 1035 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 TMEM56Q96MV1 263 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 ABI3Q9P2A4 366 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 RCL1Q9Y2P8 373 aaKnown RBP14.52□□□□□ -0.08
TOM1-210ENST00000449058 TMEM56-RWDD3S4R434 201 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 TECTAO75443 2155 aa14.52□□□□□ -0.08
TOM1-210ENST00000449058 ZNF732B4DXR9 585 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 TRDCB7Z8K6 153 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 IL32P24001 234 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 UCP2P55851 309 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 DCAF10Q5QP82 559 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 MEX3BQ6ZN04 569 aaKnown RBP14.52□□□□□ -0.09
TOM1-210ENST00000449058 APH1AQ96BI3 265 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 KIRREL1Q96J84 757 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 ARRDC1-AS1Q9H2J1 176 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 PRELID3BQ9Y3B1 194 aa14.52□□□□□ -0.09
TOM1-210ENST00000449058 COL6A3P12111 3177 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 NGFP01138 241 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 ARR3P36575 388 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 ARHGAP21Q5T5U3 1957 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 MKXQ8IYA7 352 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 OR5A2Q8NGI9 324 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 PLA2G3Q9NZ20 509 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 IL36RNQ9UBH0 155 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 FREM2Q5SZK8 3169 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 ZDBF2Q9HCK1 2354 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 NKX2-6A6NCS4 301 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 TUSC2O75896 110 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 TK1P04183 234 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 SCTP09683 121 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 RAB1AP62820 205 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 NHLH2Q02577 135 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 HERPUD1Q15011 391 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 FAM76BQ5HYJ3 339 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 C5orf24Q7Z6I8 188 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 TBC1D26Q86UD7 250 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 COMMD1Q8N668 190 aa14.51□□□□□ -0.09
TOM1-210ENST00000449058 ZMAT5Q9UDW3 170 aaKnown RBP14.51□□□□□ -0.09
TOM1-210ENST00000449058 TRAPPC2LH3BP13 241 aa14.5□□□□□ -0.09
TOM1-210ENST00000449058 BOD1Q96IK1 185 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms