RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ATAD3CQ5T2N8 411 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 Q6ZTK2 550 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 MUC20Q8N307 709 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-203ENST00000449049 SUMF2Q8NBJ7 301 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 TMEM246Q9BRR3 403 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 KCNK7Q9Y2U2 307 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 NDUFA2O43678 99 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 GLAP06280 429 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 GSTP1P09211 210 aaKnown RBP11.73□□□□□ -0.53
SHMT2-203ENST00000449049 GNB3P16520 340 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 PTBP1P26599 531 aaKnown RBP eCLIP11.73□□□□□ -0.53
SHMT2-203ENST00000449049 GPR6P46095 362 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-203ENST00000449049 ARL6IP1Q15041 203 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 CARTPTQ16568 116 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 NKAPLQ5M9Q1 402 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 DNM1P46Q6ZS02 220 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 SNX29P2Q8IUI4 249 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF561Q8N587 486 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 ST8SIA4Q92187 359 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF665Q9H7R5 613 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 PLEKHJ1Q9NW61 149 aa11.73□□□□□ -0.53
SHMT2-203ENST00000449049 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
SHMT2-203ENST00000449049 A0A0G2JMP0 313 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 A0A0X1KG70 313 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 NDUFS8O00217 210 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 PSPNO60542 156 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF737O75373 536 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 GABRA2P47869 451 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF45Q02386 682 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 MADCAM1Q13477 382 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 CDNFQ49AH0 187 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 PYHIN1Q6K0P9 492 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 FAM131AQ6UXB0 335 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 OR4M2Q8NGB6 313 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 CCL13Q99616 98 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 SULT4A1Q9BR01 284 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 DPCDQ9BVM2 203 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-203ENST00000449049 AUNIPQ9H7T9 357 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 KAAG1Q9UBP8 84 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 MAB21L2Q9Y586 359 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 TMEM82A0PJX8 343 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 MELTFP08582 738 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 IL18Q14116 193 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF79Q15937 498 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 SHEQ5VZ18 495 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 OLFML2AQ68BL7 652 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 CRYBG3Q68DQ2 2970 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 C15orf40Q8WUR7 153 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 ABHD1Q96SE0 405 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
SHMT2-203ENST00000449049 ZMAT3Q9HA38 289 aaKnown RBP11.72□□□□□ -0.53
SHMT2-203ENST00000449049 ISPDA4D126 451 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 SERPINE3A8MV23 424 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 MCRIP1C9JLW8 97 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 CA11O75493 328 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 RCVRNP35243 200 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 OR3A1P47881 315 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 DSCR9P59020 149 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 IL13RA1P78552 427 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 PITPNAQ00169 270 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 RBM39Q14498 530 aaKnown RBP11.71□□□□□ -0.53
SHMT2-203ENST00000449049 PAN3Q58A45 887 aaKnown RBP11.71□□□□□ -0.53
SHMT2-203ENST00000449049 BRICD5Q6PL45 260 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 CLEC2AQ6UVW9 174 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 FAM168AQ92567 244 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 SNX22Q96L94 193 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 FAAP24Q9BTP7 215 aa11.71□□□□□ -0.53
SHMT2-203ENST00000449049 MRPS7Q9Y2R9 242 aaKnown RBP11.71□□□□□ -0.53
SHMT2-203ENST00000449049 A0A1B0GW55 424 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 TMEM235A6NFC5 223 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 CEACAM18A8MTB9 384 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 HSPB6O14558 160 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 CTDSPLO15194 276 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 CSN2P05814 226 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L2P0CJ85 424 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L3P0CJ86 424 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L4P0CJ87 422 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L5P0CJ88 424 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L6P0CJ89 424 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L7P0CJ90 424 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 PPP5CP53041 499 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 PNLIPRP3Q17RR3 467 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 HACD4Q5VWC8 232 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 DUX4L9Q6RFH8 374 aaPredicted RBP11.71□□□□□ -0.54
SHMT2-203ENST00000449049 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 BPIFB2Q8N4F0 458 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 SPICQ8N5J4 248 aa11.71□□□□□ -0.54
SHMT2-203ENST00000449049 FAM216BQ8N7L0 139 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms