RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 NUAK2Q9H093 628 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RANGRFQ9HD47 186 aaPredicted RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 NINJ2Q9NZG7 142 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ZNF107Q9UII5 783 aaPredicted RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 SLC22A13Q9Y226 551 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 TRAV10A0A0B4J240 114 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 C5orf58C9J3I9 102 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TOR1AO14656 332 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 SLC2A1P11166 492 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ACKR3P25106 362 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 GCAP28676 217 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 GPM6AP51674 278 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 CRIP2P52943 208 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 RBM39Q14498 530 aaKnown RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 SNCBQ16143 134 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 DUSP7Q16829 419 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 AMIGO2Q86SJ2 522 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 NR2C2APQ86WQ0 139 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ADGRG5Q8IZF4 528 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ASCC1Q8N9N2 400 aaKnown RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 TMEM104Q8NE00 496 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 OR8H1Q8NGG4 311 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 OR2T10Q8NGZ9 312 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 CASTOR1Q8WTX7 329 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TMEM239Q8WW34 195 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 REEP6Q96HR9 211 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ZIM3Q96PE6 472 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TMEM38AQ9H6F2 299 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 NMNAT1Q9HAN9 279 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 GRHPRQ9UBQ7 328 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 DCDC2Q9UHG0 476 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 SLC45A2Q9UMX9 530 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TNXBP22105 4242 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TRAV27A0A087WT01 109 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 A0A0G2JLM5 398 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 XKRYO14609 159 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TGOLN2O43493 480 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 OXTP01178 125 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 IFNA10P01566 189 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 CD14P08571 375 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 HOXB9P17482 250 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 SLC7A2P52569 658 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 F2RL1P55085 397 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 UFM1P61960 85 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 GNG3P63215 75 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 SSBP2P81877 361 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 CDK6Q00534 326 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ZNF816Q0VGE8 651 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 MADCAM1Q13477 382 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 EDDM3AQ14507 147 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 DEFB114Q30KQ6 69 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 CCDC153Q494R4 210 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ANKDD1AQ495B1 522 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 HAGHLQ6PII5 290 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 PTCHD4Q6ZW05 846 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 SLC16A13Q7RTY0 426 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 PRSS45Q7RTY3 260 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 ZDHHC21Q8IVQ6 265 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 C6orf223Q8N319 242 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 FTMTQ8N4E7 242 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 OR9G1Q8NH87 305 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 AGR3Q8TD06 166 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 CORO2AQ92828 525 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 SNX22Q96L94 193 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 TSSK2Q96PF2 358 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 SPACA5Q96QH8 159 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 BARHL1Q9BZE3 327 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 RERGLQ9H628 205 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 OR14J1Q9UGF5 321 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 CRCT1Q9UGL9 99 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 KLHDC2Q9Y2U9 406 aa2.35□□□□□ -2.03
PMS1-215ENST00000447232 AMMECR1Q9Y4X0 333 aaPredicted RBP2.35□□□□□ -2.03
PMS1-215ENST00000447232 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 IGHV7-81A0A0B4J1V7 117 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 IGHV1-3A0A0C4DH29 117 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 ZNF732B4DXR9 585 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 J3QR06 171 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 TYROBPO43914 113 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 SERPINB7O75635 380 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 OR2A4O95047 310 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 MOSP00540 346 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 CPEP16870 476 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 CFL1P23528 166 aaKnown RBP2.34□□□□□ -2.03
PMS1-215ENST00000447232 ERP29P30040 261 aaKnown RBP2.34□□□□□ -2.03
PMS1-215ENST00000447232 SLC6A6P31641 620 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 FCGR2BP31994 310 aaPredicted RBP2.34□□□□□ -2.03
PMS1-215ENST00000447232 OR1E2P47887 323 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 ALDH3A2P51648 485 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 ERVK11-1P61568 191 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 KRR1Q13601 381 aaKnown RBP2.34□□□□□ -2.03
PMS1-215ENST00000447232 EIF2B1Q14232 305 aaKnown RBP2.34□□□□□ -2.03
PMS1-215ENST00000447232 PCLAFQ15004 111 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 RNF212Q495C1 297 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 LELP1Q5T871 98 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 ZNF660Q6AZW8 331 aaPredicted RBP2.34□□□□□ -2.03
PMS1-215ENST00000447232 Q6ZTC4 211 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 CNPY4Q8N129 248 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 SMYD1Q8NB12 490 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 OR52N4Q8NGI2 321 aa2.34□□□□□ -2.03
PMS1-215ENST00000447232 OR2AJ1Q8NGZ0 328 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms