RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SUMF2Q8NBJ7 301 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 SCCPDHQ8NBX0 429 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZC4H2Q9NQZ6 224 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A10PA6NDY2 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A18PA6NE21 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A16PA6NEW6 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A20PA6NIJ5 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A8PA6NJQ4 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A7PA6NKC0 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 MPTX1A8MV57 137 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A22PA8MWA6 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A12PA8MX19 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A5PA8MXJ8 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A23PA8MXZ1 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 DEGS1O15121 323 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 CD8AP01732 235 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 HOXB5P09067 269 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A15PP0C7V4 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A13PP0C7W8 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A14PP0C7W9 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM90A24PP0C7X0 464 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZNF44P15621 663 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 ECI1P42126 302 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 PIGPP57054 158 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 SURF2Q15527 256 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 MPV17LQ2QL34 196 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 ABCA11PQ4W5N1 156 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 BEX5Q5H9J7 111 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZNF660Q6AZW8 331 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 C11orf87Q6NUJ2 197 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 SGPP2Q8IWX5 399 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 MARC2Q969Z3 335 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 PKIBQ9C010 78 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 PLK3Q9H4B4 646 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 TMEM100Q9NV29 134 aa8.12□□□□□ -1.11
COL6A4P1-201ENST00000446690 IGHV1-18A0A0C4DH31 117 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 OR5H1A6NKK0 313 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 J3QT63 122 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 KCNAB3O43448 404 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 TIMM8AO60220 97 aaPredicted RBP8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 GFRA3O60609 400 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 IFNA2P01563 188 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 SCTP09683 121 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 GLI4P10075 376 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 HLA-GP17693 338 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZP3P21754 424 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 GLP1RP43220 463 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZNF83P51522 516 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 SP6Q3SY56 376 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 PHLDA2Q53GA4 152 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 KRTCAP3Q53RY4 240 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZNF474Q6S9Z5 364 aaPredicted RBP8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 UNQ6126/PRO20091Q6UXV3 157 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 THAP6Q8TBB0 222 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 LINC00052Q96N35 136 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 GSX2Q9BZM3 304 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 GSKIPQ9P0R6 139 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 SH3BGRL2Q9UJC5 107 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 LRP5LA4QPB2 252 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 PCP4L1A6NKN8 68 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 IQCF6A8MYZ5 107 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 PRSS44E7EML9 344 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 M0R1B8 84 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 RP2O75695 350 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 SNAPC5O75971 98 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 CTSDP07339 412 aaPredicted RBP8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 BMP5P22003 454 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 AADACP22760 399 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 GCH1P30793 250 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 RBMXP38159 391 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 RAB14P61106 215 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 HERV-K104P61576 105 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 B2MP61769 119 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZNF154Q13106 437 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 ZNF273Q14593 569 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 NHLRC3Q5JS37 347 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 SHEQ5VZ18 495 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM219AQ8IW50 185 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 S100PBPQ96BU1 408 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 MSL2Q9HCI7 577 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 Q9N2K0 584 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 PURGQ9UJV8 347 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 MAB21L2Q9Y586 359 aa8.11□□□□□ -1.11
COL6A4P1-201ENST00000446690 TRAV24A0A0B4J272 114 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 hCG_1807616A0A1W2PRN6 198 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 SIRPB1O00241 398 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 NXPH2O95156 264 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 RPS2P15880 293 aaKnown RBP8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 PMELP40967 661 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 NHLH1Q02575 133 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 SRSF4Q08170 494 aaKnown RBP8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 TBR1Q16650 682 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 OR8G5Q8NG78 346 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 FAM57AQ8TBR7 257 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 REG4Q9BYZ8 158 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 SHARPINQ9H0F6 387 aa8.1□□□□□ -1.11
COL6A4P1-201ENST00000446690 RAB18Q9NP72 206 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms