RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FAM90A20PA6NIJ5 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A8PA6NJQ4 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A7PA6NKC0 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 TRIM64CA6NLI5 447 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A22PA8MWA6 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A12PA8MX19 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A5PA8MXJ8 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A23PA8MXZ1 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 MCRIP1C9JLW8 97 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 M0R1W7 72 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 SLC33A1O00400 549 aaPredicted RBP11.65□□□□□ -0.54
SSBP3-208ENST00000444533 HSPB6O14558 160 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 GEMIN2O14893 280 aaKnown RBP11.65□□□□□ -0.54
SSBP3-208ENST00000444533 ZNF737O75373 536 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 MPIG6BO95866 241 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A15PP0C7V4 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A13PP0C7W8 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A14PP0C7W9 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A24PP0C7X0 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM157CP0CG43 387 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FPR2P25090 351 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 ERP29P30040 261 aaKnown RBP11.65□□□□□ -0.54
SSBP3-208ENST00000444533 PAX2Q02962 417 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 C17orf107Q6ZR85 190 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 IL17RELQ6ZVW7 336 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 OR2W3Q7Z3T1 314 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 LY6G5BQ8NDX9 201 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM46BQ96A09 425 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 NEDD4LQ96PU5 975 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 BANF2Q9H503 90 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 IFT22Q9H7X7 185 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 METTL8Q9H825 291 aaKnown RBP11.65□□□□□ -0.54
SSBP3-208ENST00000444533 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 TMEM82A0PJX8 343 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 IFITM5A6NNB3 132 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 NOTOA8MTQ0 251 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 PSPNO60542 156 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 CSN2P05814 226 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 OR3A1P47881 315 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 BPIFB3P59826 476 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 P2RY14Q15391 338 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 TAF9Q16594 264 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 HES5Q5TA89 166 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 NCR3LG1Q68D85 454 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 Q6P435 159 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 C1orf122Q6ZSJ8 110 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 GPR141Q7Z602 305 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 FGFRL1Q8N441 504 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 ZNF565Q8N9K5 539 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 OR4S1Q8NGB4 309 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 FAM3DQ96BQ1 224 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 DPCDQ9BVM2 203 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-208ENST00000444533 MS4A7Q9GZW8 240 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-208ENST00000444533 GAL3ST2Q9H3Q3 398 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 OR6C3Q9NZP0 311 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 NUP50Q9UKX7 468 aa11.64□□□□□ -0.55
SSBP3-208ENST00000444533 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
SSBP3-208ENST00000444533 AIPO00170 330 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 VSIG8P0DPA2 414 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 P2RX3P56373 397 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 GUCA2AQ02747 115 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-208ENST00000444533 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 LYPD6Q86Y78 171 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 BPIFB2Q8N4F0 458 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 SUMF2Q8NBJ7 301 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 DACT3Q96B18 629 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-208ENST00000444533 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 YIPF6Q96EC8 236 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 ING3Q9NXR8 418 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 SCOCQ9UIL1 159 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 LINC00312Q9Y6C7 94 aa11.63□□□□□ -0.55
SSBP3-208ENST00000444533 TRAV40A0A0B4J280 105 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 A0A1W2PP11 408 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 METTL21EPA6NDL7 271 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
SSBP3-208ENST00000444533 FCN3O75636 299 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 GLAP06280 429 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 ZNF728P0DKX0 622 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 SMIM18P0DKX4 95 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 CD37P11049 281 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 FUT3P21217 361 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 SDC2P34741 201 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 ERVFRD-1P60508 538 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 RPS27AP62979 156 aaKnown RBP11.62□□□□□ -0.55
SSBP3-208ENST00000444533 MXD1Q05195 221 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 AESQ08117 197 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 RAB12Q6IQ22 244 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 RBMS3Q6XE24 437 aaKnown RBP11.62□□□□□ -0.55
SSBP3-208ENST00000444533 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 TMEM104Q8NE00 496 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 OR51D1Q8NGF3 324 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 Q96M66 194 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 CENPOQ9BU64 300 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms