RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 WDR5BQ86VZ2 330 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 C20orf144Q9BQM9 153 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 TCN2P20062 427 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 PTGER4P35408 488 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 RRADP55042 308 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 SPEM2Q0P670 501 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 FBXO46Q6PJ61 603 aaPredicted RBP4.4□□□□□ -1.7
HERC1-201ENST00000443617 CA13Q8N1Q1 262 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 NOXO1Q8NFA2 376 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 TMEM170AQ8WVE7 144 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 RNF133Q8WVZ7 376 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 ASCL3Q9NQ33 180 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 ANXA10Q9UJ72 324 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 TRAV34A0A0B4J273 112 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 SPINT1O43278 529 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 SELEP16581 610 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 DTYMKP23919 212 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 CD226Q15762 336 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 NEIL1Q96FI4 390 aaPredicted RBP4.4□□□□□ -1.7
HERC1-201ENST00000443617 TMEM9BQ9NQ34 198 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 SLC17A4Q9Y2C5 497 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 TDRD15B5MCY1 1934 aaKnown RBP4.4□□□□□ -1.7
HERC1-201ENST00000443617 A0A1W2PNV4 684 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 RBMXL2O75526 392 aaKnown RBP4.4□□□□□ -1.7
HERC1-201ENST00000443617 GALNSP34059 522 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 FAM78BQ5VT40 261 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 WFIKKN1Q96NZ8 548 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 ABHD14BQ96IU4 210 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 MED13Q9UHV7 2174 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 NKX6-3A6NJ46 265 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 DXOO77932 396 aaKnown RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 CARD18P57730 90 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 DCAF7P61962 342 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 FMODQ06828 376 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 TMEM222Q9H0R3 208 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 TRBV11-1A0A0K0K1C0 115 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 KLF3P57682 345 aaPredicted RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 UBE2G2P60604 165 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 ZNF154Q13106 437 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 MENTQ9BUN1 341 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 HCFC1R1Q9NWW0 138 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 TCFL5Q9UL49 500 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 MGAMO43451 1857 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 CEACAM18A8MTB9 384 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 WDR25Q64LD2 544 aaPredicted RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 MRGPRFQ96AM1 343 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 SCRT1Q9BWW7 348 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 LTBP1Q14766 1721 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 ZNF16P17020 682 aaPredicted RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 GRB2P62993 217 aaKnown RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 POU3F1Q03052 451 aaPredicted RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 PRR22Q8IZ63 422 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 SLC39A11Q8N1S5 342 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 OR4B1Q8NGF8 309 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 MBNL1Q9NR56 388 aaKnown RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 PLXNB1O43157 2135 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 ZNF205O95201 554 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 APODP05090 189 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 C17orf99Q6UX52 265 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 CISD2Q8N5K1 135 aaKnown RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 DUSP15Q9H1R2 295 aaPredicted RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 FAM206AQ9NX38 181 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 MRPS2Q9Y399 296 aaKnown RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 DENND4AQ7Z401 1863 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 PRR14LQ5THK1 2151 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 IRF2P14316 349 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 GCH1P30793 250 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
HERC1-201ENST00000443617 BSXQ3C1V8 233 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 FAM3CQ92520 227 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 SLC2A9Q9NRM0 540 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 COPS7AQ9UBW8 275 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 ZFP30Q9Y2G7 519 aa4.4□□□□□ -1.71
HERC1-201ENST00000443617 TSC2P49815 1807 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 IGSF23A1L1A6 192 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OR5G3P0C626 314 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 CEACAM1P13688 526 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 INSM1Q01101 510 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 KISS1Q15726 138 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PRTGQ2VWP7 1150 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 DMRTC1Q5HYR2 192 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PHYHD1Q5SRE7 291 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 C6orf201Q7Z4U5 140 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 ADAMTS18Q8TE60 1221 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OIT3Q8WWZ8 545 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 LPAR5Q9H1C0 372 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 RER1O15258 196 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 TNFSF10P50591 281 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 SEC13P55735 322 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 LCN2P80188 198 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 MRPS11P82912 194 aaKnown RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 FAM103A1Q9BTL3 118 aaKnown RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 UMODP07911 640 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OR8G2PQ6IF36 304 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OR52M1Q8NGK5 317 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PINX1Q96BK5 328 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms