RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 A0A1W2PRD5 423 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 A0A1W2PRF3 423 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 A0A1W2PRM7 423 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 MGST3O14880 152 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 DEGS1O15121 323 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 CSTBP04080 98 aaKnown RBP14.78□□□□□ -0.04
CPSF4-205ENST00000440514 GALP22466 123 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 LMO1P25800 156 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 GABRA5P31644 462 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 PSMD7P51665 324 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 RBM11P57052 281 aaKnown RBP14.78□□□□□ -0.04
CPSF4-205ENST00000440514 ERVFRD-1P60508 538 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 IL13RA2Q14627 380 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 ATXN7L3Q14CW9 347 aaPredicted RBP14.78□□□□□ -0.04
CPSF4-205ENST00000440514 SLC22A6Q4U2R8 563 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 UBE2UQ5VVX9 321 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 AWAT2Q6E213 333 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 ZNF773Q6PK81 442 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 GLIPR1L1Q6UWM5 242 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 OSR2Q8N2R0 312 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 PNKDQ8N490 385 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 CHST4Q8NCG5 386 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 OR5D13Q8NGL4 314 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 TNFRSF14Q92956 283 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 C1orf147Q96MC9 270 aaPredicted RBP14.78□□□□□ -0.04
CPSF4-205ENST00000440514 METTL8Q9H825 291 aaKnown RBP14.78□□□□□ -0.04
CPSF4-205ENST00000440514 ESM1Q9NQ30 184 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 ING3Q9NXR8 418 aa14.78□□□□□ -0.04
CPSF4-205ENST00000440514 A0A0A6YYJ9 748 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 RNF212BA8MTL3 300 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 PSMB9P28065 219 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 DLX6P56179 175 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 P2RX3P56373 397 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 DEFB112Q30KQ8 113 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 C1orf122Q6ZSJ8 110 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 USP43Q70EL4 1123 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 PIP4P2Q8N4L2 257 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 COQ2Q96H96 371 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 UQCC2Q9BRT2 126 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 NDUFB11Q9NX14 153 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 GHRLQ9UBU3 117 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 ST3GAL6Q9Y274 331 aa14.77□□□□□ -0.05
CPSF4-205ENST00000440514 TRAV24A0A0B4J272 114 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 GEMIN2O14893 280 aaKnown RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 SRMP19623 302 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 PRTN3P24158 256 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 MEF2CQ06413 473 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 AESQ08117 197 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 PAN3Q58A45 887 aaKnown RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 NHLRC3Q5JS37 347 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 HCP5Q6MZN7 132 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 METAP1DQ6UB28 335 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 RBMS3Q6XE24 437 aaKnown RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 ZNF782Q6ZMW2 699 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 C11orf42Q8N5U0 333 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 ZDHHC22Q8N966 263 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 DUX5Q96PT3 197 aa14.76□□□□□ -0.05
CPSF4-205ENST00000440514 UNKLQ9H9P5 680 aaKnown RBP14.76□□□□□ -0.05
CPSF4-205ENST00000440514 A0A087WXM4 84 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 A0A0U1RQK1 487 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 hADV38S2A0JD32 116 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 FUOMA2VDF0 154 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 CCRL2O00421 344 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 OR7C1O76099 320 aaPredicted RBP14.75□□□□□ -0.05
CPSF4-205ENST00000440514 CALRP27797 417 aaKnown RBP14.75□□□□□ -0.05
CPSF4-205ENST00000440514 GLIPR1P48060 266 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 BPIFB3P59826 476 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 GLT8D1Q68CQ7 371 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 NCR3LG1Q68D85 454 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 MRPS24Q96EL2 167 aaKnown RBP14.75□□□□□ -0.05
CPSF4-205ENST00000440514 ZNF714Q96N38 554 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 GFI1Q99684 422 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 KCNK15Q9H427 330 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 BANF2Q9H503 90 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 LINC00312Q9Y6C7 94 aa14.75□□□□□ -0.05
CPSF4-205ENST00000440514 hCG_1809904A0A1W2PP81 198 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 A0A1W2PPE2 198 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 A0A1W2PR64 198 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 A0A1W2PRV1 198 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 C17orf98A8MV24 154 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 NPFFO15130 113 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 CSN2P05814 226 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 UBBP0CG47 229 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 ZNF728P0DKX0 622 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 GTF2F2P13984 249 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 COX7A1P24310 79 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 ERP29P30040 261 aaKnown RBP14.74□□□□□ -0.05
CPSF4-205ENST00000440514 GUCA2AQ02747 115 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 BAMBIQ13145 260 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 KRBOX4Q5JUW0 171 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 TRAPPC6BQ86SZ2 158 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 LINC00596Q86U02 117 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 TMEM104Q8NE00 496 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 PLPPR1Q8TBJ4 325 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 TMEM158Q8WZ71 300 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 FAM46BQ96A09 425 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 JMJD8Q96S16 334 aa14.74□□□□□ -0.05
CPSF4-205ENST00000440514 FBN1P35555 2871 aaKnown RBP14.73□□□□□ -0.05
CPSF4-205ENST00000440514 ODAMA1E959 279 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms