RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TAF15Q92804 592 aaKnown RBP eCLIP19.27■□□□□ 0.68
VARS-217ENST00000440048 ZNF714Q96N38 554 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 DERL3Q96Q80 235 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 NR1H4Q96RI1 486 aaPredicted RBP19.27■□□□□ 0.68
VARS-217ENST00000440048 ZNF184Q99676 751 aaPredicted RBP19.27■□□□□ 0.68
VARS-217ENST00000440048 PPA2Q9H2U2 334 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 ZNRD1Q9P1U0 126 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 ING4Q9UNL4 249 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 LINC00312Q9Y6C7 94 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 FAM181BA6NEQ2 426 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 SLC33A1O00400 549 aaPredicted RBP19.26■□□□□ 0.67
VARS-217ENST00000440048 CDRT1O95170 752 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 PAHP00439 452 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 RBP4P02753 201 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 TGFBR2P37173 567 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 FOXL1Q12952 345 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 SPHARQ15513 63 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 OR51T1Q8NGJ9 327 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 C17orf50Q8WW18 174 aa19.26■□□□□ 0.67
VARS-217ENST00000440048 PIN1P1O15428 100 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 HTR3BO95264 441 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 C3orf56Q8N813 242 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 AJUBAQ96IF1 538 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 CNBD2Q96M20 576 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 METTL9Q9H1A3 318 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 DPAGT1Q9H3H5 408 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 IL36GQ9NZH8 169 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 FOXJ3Q9UPW0 622 aa19.25■□□□□ 0.67
VARS-217ENST00000440048 CSN2P05814 226 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 IGHV1-8P0DP01 117 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 CRHBPP24387 322 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 CFPP27918 469 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 AESQ08117 197 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 IL13RA2Q14627 380 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 MED22Q15528 200 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 PIGYQ3MUY2 71 aa19.24■□□□□ 0.67
VARS-217ENST00000440048 FUOMA2VDF0 154 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 RGS10O43665 173 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 GLIPR1P48060 266 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 TAF9Q16594 264 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 TRAPPC6BQ86SZ2 158 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 BEND2Q8NDZ0 799 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 THRSPQ92748 146 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 COQ2Q96H96 371 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 S100A13Q99584 98 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 RAB26Q9ULW5 256 aa19.23■□□□□ 0.67
VARS-217ENST00000440048 UBE2J1Q9Y385 318 aaPredicted RBP19.23■□□□□ 0.67
VARS-217ENST00000440048 TRAV24A0A0B4J272 114 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 MAS1P04201 325 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 CRYBA1P05813 215 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 MAPK3P27361 379 aaPredicted RBP19.22■□□□□ 0.67
VARS-217ENST00000440048 VHLP40337 213 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 INSL4Q14641 139 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 ATXN7L3Q14CW9 347 aaPredicted RBP19.22■□□□□ 0.67
VARS-217ENST00000440048 KRBOX4Q5JUW0 171 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 UNQ9370/PRO34162Q6UXP9 181 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 MS4A15Q8N5U1 240 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 OR13D1Q8NGV5 346 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 DYRK2Q92630 601 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 CORO2AQ92828 525 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 TMED9Q9BVK6 235 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 ING3Q9NXR8 418 aa19.22■□□□□ 0.67
VARS-217ENST00000440048 TRGV10A0A0A0MS01 117 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 ODAMA1E959 279 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 HSPB6O14558 160 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 GPR137BO60478 399 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 CSTBP04080 98 aaKnown RBP19.21■□□□□ 0.67
VARS-217ENST00000440048 SERPINA2P20848 420 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 OMGP23515 440 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 LGALS4P56470 323 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 ACSM3Q53FZ2 586 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 PAN3Q58A45 887 aaKnown RBP19.21■□□□□ 0.67
VARS-217ENST00000440048 NHLRC3Q5JS37 347 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 OSR2Q8N2R0 312 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 JAGN1Q8N5M9 183 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 MUL1Q969V5 352 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 CCDC90BQ9GZT6 254 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 ST3GAL6Q9Y274 331 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 SESN1Q9Y6P5 492 aa19.21■□□□□ 0.67
VARS-217ENST00000440048 BTBD17A6NE02 478 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 ODF3BA8MYP8 253 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 CLPXO76031 633 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 PAX6P26367 422 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 RBM11P57052 281 aaKnown RBP19.2■□□□□ 0.66
VARS-217ENST00000440048 GPR50Q13585 617 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 SLC22A6Q4U2R8 563 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 RBM48Q5RL73 367 aaKnown RBP19.2■□□□□ 0.66
VARS-217ENST00000440048 PRSS48Q7RTY5 328 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 CDH26Q8IXH8 852 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 OR11H6Q8NGC7 330 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 MEGF9Q9H1U4 602 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 PPIL3Q9H2H8 161 aaKnown RBP19.2■□□□□ 0.66
VARS-217ENST00000440048 C1RLQ9NZP8 487 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 ZNF581Q9P0T4 197 aa19.2■□□□□ 0.66
VARS-217ENST00000440048 MRPS28Q9Y2Q9 187 aaKnown RBP19.2■□□□□ 0.66
VARS-217ENST00000440048 A0A1W2PP11 408 aa19.19■□□□□ 0.66
VARS-217ENST00000440048 ZNF780AO75290 641 aaPredicted RBP19.19■□□□□ 0.66
VARS-217ENST00000440048 MMP23AO75900 390 aa19.19■□□□□ 0.66
VARS-217ENST00000440048 ARG1P05089 322 aa19.19■□□□□ 0.66
VARS-217ENST00000440048 GP2P55259 537 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms