RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SECTM1Q8WVN6 248 aa12.8□□□□□ -0.36
CPSF7-205ENST00000439958 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
CPSF7-205ENST00000439958 BSPH1Q075Z2 132 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 MOGAT3Q86VF5 341 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 OR2AK2Q8NG84 335 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 OR2V2Q96R30 315 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 DPCDQ9BVM2 203 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 ESRP2Q9H6T0 727 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 PAIP2BQ9ULR5 123 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 SCTP09683 121 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 ZNF81P51508 661 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 CCL8P80075 99 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 SP6Q3SY56 376 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 FAM122AQ96E09 287 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 METTL8Q9H825 291 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 GSKIPQ9P0R6 139 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 FBXO9Q9UK97 447 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 ZSCAN5BA6NJL1 495 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 GRNP28799 593 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 FIP1L1Q6UN15 594 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 PEG10Q86TG7 708 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 ARRDC1Q8N5I2 433 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 NUDT16L1Q9BRJ7 211 aaKnown RBP12.79□□□□□ -0.36
CPSF7-205ENST00000439958 CXXC4Q9H2H0 198 aa12.79□□□□□ -0.36
CPSF7-205ENST00000439958 HOXB5P09067 269 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 SULT1A3P0DMM9 295 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 SULT1A4P0DMN0 295 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 SLC36A1Q7Z2H8 476 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 RFPL4AA6NLU0 287 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 RFPL4AL1F8VTS6 287 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 OR2H2O95918 312 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 TBPP20226 339 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 IL24Q13007 206 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 MRGPRFQ96AM1 343 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
CPSF7-205ENST00000439958 FN3KRPQ9HA64 309 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 IL36GQ9NZH8 169 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 SLC23A1Q9UHI7 598 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 ASCL4Q6XD76 172 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 DEDD2Q8WXF8 326 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 WFIKKN1Q96NZ8 548 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 PHB2Q99623 299 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 PIGMQ9H3S5 423 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 DLL4Q9NR61 685 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 HSF4Q9ULV5 492 aa12.78□□□□□ -0.36
CPSF7-205ENST00000439958 FOXI3A8MTJ6 420 aaPredicted RBP12.77□□□□□ -0.36
CPSF7-205ENST00000439958 ARPC5O15511 151 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 GZMKP49863 264 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 SORDQ00796 357 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 TCTE3Q8IZS6 198 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 ITLN1Q8WWA0 313 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.36
CPSF7-205ENST00000439958 J3QW42 95 aa12.77□□□□□ -0.37
CPSF7-205ENST00000439958 SH2D1BO14796 132 aa12.77□□□□□ -0.37
CPSF7-205ENST00000439958 TNFSF12O43508 249 aa12.77□□□□□ -0.37
CPSF7-205ENST00000439958 H2BFSP57053 126 aa12.77□□□□□ -0.37
CPSF7-205ENST00000439958 SPRNQ5BIV9 151 aa12.77□□□□□ -0.37
CPSF7-205ENST00000439958 ZBTB8BQ8NAP8 495 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-205ENST00000439958 OR11H4Q8NGC9 324 aa12.77□□□□□ -0.37
CPSF7-205ENST00000439958 CLEC4MQ9H2X3 399 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-205ENST00000439958 TRAV24A0A0B4J272 114 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 C1QBP02746 253 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 TK1P04183 234 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 IL5P05113 134 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 ERP29P30040 261 aaKnown RBP12.76□□□□□ -0.37
CPSF7-205ENST00000439958 MEX3BQ6ZN04 569 aaKnown RBP12.76□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM200AQ86VY9 491 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 MEIKINA0A087WXM9 373 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 C9orf170A2RU37 121 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 SNRPGP15A8MWD9 76 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 HAND1O96004 215 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 VAX1Q5SQQ9 334 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 LYG2Q86SG7 212 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 NEUROG1Q92886 237 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 KIRREL1Q96J84 757 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 VKORC1Q9BQB6 163 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 PLK3Q9H4B4 646 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 MAP1AP78559 2803 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-205ENST00000439958 ADAP1O75689 374 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 GLRXP35754 106 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 AESQ08117 197 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
CPSF7-205ENST00000439958 MPV17LQ2QL34 196 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 PKIBQ9C010 78 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 SPACA1Q9HBV2 294 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 COMMD9Q9P000 198 aa12.76□□□□□ -0.37
CPSF7-205ENST00000439958 ZNF107Q9UII5 783 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-205ENST00000439958 IGHV3-13P01766 116 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 PIGPP57054 158 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 C20orf204Q6ZNR8 217 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms