RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 JAM3Q9BX67 310 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 GAL3ST2Q9H3Q3 398 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 ODAMA1E959 279 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 F2RL2O00254 374 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 SLC33A1O00400 549 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 HCKP08631 526 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF44P15621 663 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 CDK2P24941 298 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 HTR1DP28221 377 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 BDH1Q02338 343 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 SCN1BQ07699 218 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF691Q5VV52 312 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 LPCAT4Q643R3 524 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 OR52W1Q6IF63 320 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 ABHD12Q8N2K0 398 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 HAVCR2Q8TDQ0 301 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 WIPF2Q8TF74 440 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 RGP1Q92546 391 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 PRSS22Q9GZN4 317 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 FGF20Q9NP95 211 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 DHDHQ9UQ10 334 aa16.32■□□□□ 0.2
NCKIPSD-206ENST00000439518 DEGS1O15121 323 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 IGLV1-47P01700 117 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 CD34P28906 385 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 GDNFP39905 211 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 GTF2A1P52655 376 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 SMN1Q16637 294 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 ELP2Q6IA86 826 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 RTN4RL2Q86UN3 420 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 TSEN15Q8WW01 171 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 DPM3Q9P2X0 92 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 NOTCH3Q9UM47 2321 aa16.31■□□□□ 0.2
NCKIPSD-206ENST00000439518 EBAG9O00559 213 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 OPN1MWP04001 364 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 OPN1MW2P0DN77 364 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 OPN1MW3P0DN78 364 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 MTNR1BP49286 362 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 BLCAPP62952 87 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 Q6ZS46 218 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 PXT1Q8NFP0 134 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 RDH12Q96NR8 316 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 WNT10AQ9GZT5 417 aa16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 SMPD3Q9NY59 655 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-206ENST00000439518 CGB3P0DN86 165 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 CGB7P0DN87 165 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 RAB3AP20336 220 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 ETV1P50549 477 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 ATXN7L3Q14CW9 347 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 CCDC58Q4VC31 144 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 KRBOX4Q5JUW0 171 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 XAF1Q6GPH4 301 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 C1QL4Q86Z23 238 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 Q8NFD4 153 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 OR51A2Q8NGJ7 313 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 OR51T1Q8NGJ9 327 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF596Q8TC21 504 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF286AQ9HBT8 521 aa16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 PRKDCP78527 4128 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-206ENST00000439518 A0A087X0M5 115 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 A0A1B0GX30 115 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF729A6NN14 1252 aaPredicted RBP16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 GABRPO00591 440 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 FBXO24O75426 580 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 BAG2O95816 211 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 CD28P10747 220 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 PTGFRP43088 359 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 SOX2P48431 317 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 C17orf58Q2M2W7 97 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 RPL22L1Q6P5R6 122 aaKnown RBP16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 ASCL4Q6XD76 172 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF555Q8NEP9 628 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 CPNE2Q96FN4 548 aaPredicted RBP16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 PPIL3Q9H2H8 161 aaKnown RBP16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 NCOR1P1Q9H4R4 102 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 ING3Q9NXR8 418 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 OR6C3Q9NZP0 311 aa16.28■□□□□ 0.2
NCKIPSD-206ENST00000439518 TRAV24A0A0B4J272 114 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 FAM172BPA6NC97 362 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 H0YJX3 145 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 DCKP27707 260 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZSCAN26Q16670 478 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 UTF1Q5T230 341 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 LYG1Q8N1E2 194 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 OR4D6Q8NGJ1 314 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 CNIH3Q8TBE1 160 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 TNFAIP8L1Q8WVP5 186 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 NR1H4Q96RI1 486 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 TAS2R4Q9NYW5 299 aa16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 SIRT4Q9Y6E7 314 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-206ENST00000439518 KBTBD11-OT1A0A1B0GTJ5 212 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 LEUTXA8MZ59 168 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 LY6LH3BQJ8 138 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 BUB1B-PAK6H3BSN5 160 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 H3BUI4 141 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 MAGEB3O15480 346 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 CD2P06729 351 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 CD24P25063 80 aa16.26■□□□□ 0.19
NCKIPSD-206ENST00000439518 BRS3P32247 399 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms