RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 MRPS10P82664 201 aaKnown RBP10.57□□□□□ -0.72
SCLT1-202ENST00000439369 HOXA4Q00056 320 aaPredicted RBP10.57□□□□□ -0.72
SCLT1-202ENST00000439369 PITPNAQ00169 270 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 SCN1BQ07699 218 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 MOGAT2Q3SYC2 334 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 LRRC10Q5BKY1 277 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 SPANXN2Q5MJ10 180 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 Q5PR19 223 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 ATAD3CQ5T2N8 411 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 C17orf107Q6ZR85 190 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 OR8H2Q8N162 312 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 C19orf18Q8NEA5 215 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 OR8B3Q8NGG8 313 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 S100ZQ8WXG8 99 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 ST8SIA4Q92187 359 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 RAB39BQ96DA2 213 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 OR8B2Q96RD0 313 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 CCL13Q99616 98 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 SOSTQ9BQB4 213 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 PECRQ9BY49 303 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 PCDHB10Q9UN67 800 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 MAB21L2Q9Y586 359 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 TRAV18A0A075B6X5 111 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 TMEM82A0PJX8 343 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 FABP12A6NFH5 140 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 PSPNO60542 156 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 IGHV2-5P01817 119 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 RPS2P15880 293 aaKnown RBP10.56□□□□□ -0.72
SCLT1-202ENST00000439369 ERP29P30040 261 aaKnown RBP10.56□□□□□ -0.72
SCLT1-202ENST00000439369 OR3A1P47881 315 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 CEBPDP49716 269 aaPredicted RBP10.56□□□□□ -0.72
SCLT1-202ENST00000439369 TAS2R20P59543 309 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF45Q02386 682 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF260Q3ZCT1 412 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 CDNFQ49AH0 187 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 NKAPLQ5M9Q1 402 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 PYHIN1Q6K0P9 492 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 C6orf201Q7Z4U5 140 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 GAPTQ8N292 157 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 ASCC1Q8N9N2 400 aaKnown RBP10.56□□□□□ -0.72
SCLT1-202ENST00000439369 ARHGAP5-AS1Q96IT6 56 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 DMRTB1Q96MA1 342 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 SHARPINQ9H0F6 387 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 AUNIPQ9H7T9 357 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 SCPEP1Q9HB40 452 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 LPAR3Q9UBY5 353 aa10.56□□□□□ -0.72
SCLT1-202ENST00000439369 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 SULT1C2O00338 296 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 CTDSPLO15194 276 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 ECDO95905 644 aaPredicted RBP10.55□□□□□ -0.72
SCLT1-202ENST00000439369 RBMXP38159 391 aaKnown RBP10.55□□□□□ -0.72
SCLT1-202ENST00000439369 PDCD1Q15116 288 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 GRK1Q15835 563 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 HACD4Q5VWC8 232 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 LYPD2Q6UXB3 125 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 GDPD3Q7L5L3 318 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 TMEM185AQ8NFB2 350 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 NEK7Q8TDX7 302 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 SULT4A1Q9BR01 284 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 CHST6Q9GZX3 395 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 PPA2Q9H2U2 334 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 C12orf4Q9NQ89 552 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF581Q9P0T4 197 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 CTSZQ9UBR2 303 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 SLC25A10Q9UBX3 287 aaPredicted RBP10.55□□□□□ -0.72
SCLT1-202ENST00000439369 METRNQ9UJH8 293 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 KCNK7Q9Y2U2 307 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 CELSR2Q9HCU4 2923 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 LRBAP50851 2863 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
SCLT1-202ENST00000439369 CRYBG3Q68DQ2 2970 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 SPG11Q96JI7 2443 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 TMEM30CPA0ZSE6 113 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 A8MXK9 166 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 DVL1O14640 695 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 NAPSAO96009 420 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 CD3GP09693 182 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 GNB3P16520 340 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
SCLT1-202ENST00000439369 DTYMKP23919 212 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 PRSS3P35030 304 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 CBX5P45973 191 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 P2RX3P56373 397 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 GNG2P59768 71 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 LMO4P61968 165 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 MRPS15P82914 257 aaKnown RBP10.54□□□□□ -0.72
SCLT1-202ENST00000439369 MEF2CQ06413 473 aaPredicted RBP10.54□□□□□ -0.72
SCLT1-202ENST00000439369 LOXL1Q08397 574 aaPredicted RBP10.54□□□□□ -0.72
SCLT1-202ENST00000439369 SRSF7Q16629 238 aaKnown RBP eCLIP10.54□□□□□ -0.72
SCLT1-202ENST00000439369 ESCO2Q56NI9 601 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 CD276Q5ZPR3 534 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 FAM131AQ6UXB0 335 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF841Q6ZN19 808 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms