RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 LMO1P25800 156 aa13.25□□□□□ -0.29
APP-208ENST00000439274 ITGA3P26006 1051 aa13.25□□□□□ -0.29
APP-208ENST00000439274 GNRHRP30968 328 aa13.25□□□□□ -0.29
APP-208ENST00000439274 UCP3P55916 312 aa13.25□□□□□ -0.29
APP-208ENST00000439274 RPS18P62269 152 aaKnown RBP13.25□□□□□ -0.29
APP-208ENST00000439274 GNMTQ14749 295 aa13.25□□□□□ -0.29
APP-208ENST00000439274 CCDC71LQ8N9Z2 235 aa13.25□□□□□ -0.29
APP-208ENST00000439274 OR10D3Q8NH80 312 aa13.25□□□□□ -0.29
APP-208ENST00000439274 ABHD3Q8WU67 409 aa13.25□□□□□ -0.29
APP-208ENST00000439274 ZNF845Q96IR2 970 aaPredicted RBP13.25□□□□□ -0.29
APP-208ENST00000439274 SLC7A10Q9NS82 523 aa13.25□□□□□ -0.29
APP-208ENST00000439274 IL36GQ9NZH8 169 aa13.25□□□□□ -0.29
APP-208ENST00000439274 CRIM1Q9NZV1 1036 aa13.25□□□□□ -0.29
APP-208ENST00000439274 TNRC6BQ9UPQ9 1833 aaKnown RBP13.25□□□□□ -0.29
APP-208ENST00000439274 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
APP-208ENST00000439274 PRSS44E7EML9 344 aa13.24□□□□□ -0.29
APP-208ENST00000439274 K7N7A8 449 aa13.24□□□□□ -0.29
APP-208ENST00000439274 HSPB6O14558 160 aa13.24□□□□□ -0.29
APP-208ENST00000439274 AGAP20933 346 aa13.24□□□□□ -0.29
APP-208ENST00000439274 CLDN15P56746 228 aa13.24□□□□□ -0.29
APP-208ENST00000439274 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
APP-208ENST00000439274 OR2C3Q8N628 320 aa13.24□□□□□ -0.29
APP-208ENST00000439274 OR2Y1Q8NGV0 311 aa13.24□□□□□ -0.29
APP-208ENST00000439274 NAT6Q93015 286 aa13.24□□□□□ -0.29
APP-208ENST00000439274 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
APP-208ENST00000439274 KCNJ16Q9NPI9 418 aa13.24□□□□□ -0.29
APP-208ENST00000439274 ATPIF1Q9UII2 106 aa13.24□□□□□ -0.29
APP-208ENST00000439274 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
APP-208ENST00000439274 ZNF816-ZNF321PA0A0X1KG74 233 aa13.24□□□□□ -0.29
APP-208ENST00000439274 SSSCA1O60232 199 aa13.24□□□□□ -0.29
APP-208ENST00000439274 ZNF14P17017 642 aaPredicted RBP13.24□□□□□ -0.29
APP-208ENST00000439274 SPINK2P20155 84 aa13.24□□□□□ -0.29
APP-208ENST00000439274 SRD5A2P31213 254 aa13.24□□□□□ -0.29
APP-208ENST00000439274 SULT1A1P50225 295 aa13.24□□□□□ -0.29
APP-208ENST00000439274 OR8B8Q15620 311 aa13.24□□□□□ -0.29
APP-208ENST00000439274 TMEM211Q6ICI0 200 aa13.24□□□□□ -0.29
APP-208ENST00000439274 TBC1D26Q86UD7 250 aa13.24□□□□□ -0.29
APP-208ENST00000439274 ZFP62Q8NB50 900 aaPredicted RBP13.24□□□□□ -0.29
APP-208ENST00000439274 CPEB3Q8NE35 698 aaKnown RBP13.24□□□□□ -0.29
APP-208ENST00000439274 SLAMF9Q96A28 289 aa13.24□□□□□ -0.29
APP-208ENST00000439274 GPR35Q9HC97 309 aa13.24□□□□□ -0.29
APP-208ENST00000439274 IL36RNQ9UBH0 155 aa13.24□□□□□ -0.29
APP-208ENST00000439274 ZNF724A8MTY0 619 aa13.23□□□□□ -0.29
APP-208ENST00000439274 TRDCB7Z8K6 153 aa13.23□□□□□ -0.29
APP-208ENST00000439274 CFIP05156 583 aa13.23□□□□□ -0.29
APP-208ENST00000439274 RAB5AP20339 215 aa13.23□□□□□ -0.29
APP-208ENST00000439274 BCL3P20749 454 aa13.23□□□□□ -0.29
APP-208ENST00000439274 OR2B8PP59922 312 aa13.23□□□□□ -0.29
APP-208ENST00000439274 RNF212Q495C1 297 aa13.23□□□□□ -0.29
APP-208ENST00000439274 CXorf66Q5JRM2 361 aaPredicted RBP13.23□□□□□ -0.29
APP-208ENST00000439274 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
APP-208ENST00000439274 ADAM5Q6NVV9 412 aa13.23□□□□□ -0.29
APP-208ENST00000439274 ZNF100Q8IYN0 542 aa13.23□□□□□ -0.29
APP-208ENST00000439274 ZNF561Q8N587 486 aa13.23□□□□□ -0.29
APP-208ENST00000439274 TMEM171Q8WVE6 324 aa13.23□□□□□ -0.29
APP-208ENST00000439274 EXTL1Q92935 676 aa13.23□□□□□ -0.29
APP-208ENST00000439274 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
APP-208ENST00000439274 C11orf1Q9H5F2 150 aa13.23□□□□□ -0.29
APP-208ENST00000439274 UBE2J1Q9Y385 318 aaPredicted RBP13.23□□□□□ -0.29
APP-208ENST00000439274 PUS1Q9Y606 427 aaKnown RBP eCLIP13.23□□□□□ -0.29
APP-208ENST00000439274 P04436 131 aa13.23□□□□□ -0.29
APP-208ENST00000439274 SCTP09683 121 aa13.23□□□□□ -0.29
APP-208ENST00000439274 TDGF1P13385 188 aa13.23□□□□□ -0.29
APP-208ENST00000439274 CCL2P13500 99 aa13.23□□□□□ -0.29
APP-208ENST00000439274 CCNOP22674 350 aa13.23□□□□□ -0.29
APP-208ENST00000439274 ATP6V0CP27449 155 aa13.23□□□□□ -0.29
APP-208ENST00000439274 RAB5CP51148 216 aa13.23□□□□□ -0.29
APP-208ENST00000439274 FABP9Q0Z7S8 132 aa13.23□□□□□ -0.29
APP-208ENST00000439274 OR2G3Q8NGZ4 309 aa13.23□□□□□ -0.29
APP-208ENST00000439274 FGF23Q9GZV9 251 aaPredicted RBP13.23□□□□□ -0.29
APP-208ENST00000439274 PARPBPQ9NWS1 579 aa13.23□□□□□ -0.29
APP-208ENST00000439274 LRRC3CA6NJW4 275 aa13.22□□□□□ -0.29
APP-208ENST00000439274 UBE2CO00762 179 aa13.22□□□□□ -0.29
APP-208ENST00000439274 ADAM20O43506 726 aa13.22□□□□□ -0.29
APP-208ENST00000439274 ZNF806P0C7X5 589 aa13.22□□□□□ -0.29
APP-208ENST00000439274 NKX2-1P43699 371 aaPredicted RBP13.22□□□□□ -0.29
APP-208ENST00000439274 Q0VFX4 171 aa13.22□□□□□ -0.29
APP-208ENST00000439274 ZNF818PQ6ZRF7 136 aa13.22□□□□□ -0.29
APP-208ENST00000439274 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
APP-208ENST00000439274 ZNF695Q8IW36 515 aa13.22□□□□□ -0.29
APP-208ENST00000439274 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
APP-208ENST00000439274 IGKV1D-13A0A0B4J2D9 117 aa13.22□□□□□ -0.29
APP-208ENST00000439274 DNPH1O43598 174 aa13.22□□□□□ -0.29
APP-208ENST00000439274 MMP7P09237 267 aaPredicted RBP13.22□□□□□ -0.29
APP-208ENST00000439274 IGKV1-13P0DP09 117 aa13.22□□□□□ -0.29
APP-208ENST00000439274 OTX2P32243 289 aa13.22□□□□□ -0.29
APP-208ENST00000439274 FOLR3P41439 243 aa13.22□□□□□ -0.29
APP-208ENST00000439274 ABLIM2Q6H8Q1 611 aa13.22□□□□□ -0.29
APP-208ENST00000439274 GAPTQ8N292 157 aa13.22□□□□□ -0.29
APP-208ENST00000439274 OR2V1Q8NHB1 315 aa13.22□□□□□ -0.29
APP-208ENST00000439274 ADGRG7Q96K78 797 aa13.22□□□□□ -0.29
APP-208ENST00000439274 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
APP-208ENST00000439274 PAPOLGQ9BWT3 736 aaKnown RBP13.22□□□□□ -0.29
APP-208ENST00000439274 GLRX2Q9NS18 164 aa13.22□□□□□ -0.29
APP-208ENST00000439274 DEPPQ9NTK1 212 aa13.22□□□□□ -0.29
APP-208ENST00000439274 PINLYPA6NC86 204 aa13.21□□□□□ -0.29
APP-208ENST00000439274 C3orf80F5H4A9 247 aa13.21□□□□□ -0.29
APP-208ENST00000439274 CST7O76096 145 aa13.21□□□□□ -0.29
APP-208ENST00000439274 CEBPGP53567 150 aa13.21□□□□□ -0.29
APP-208ENST00000439274 ZXDAP98168 799 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms