RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 C1orf54Q8WWF1 131 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 CDKL2Q92772 493 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 RDH5Q92781 318 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 TNFRSF14Q92956 283 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 HAUS1Q96CS2 278 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 ECHDC3Q96DC8 303 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 CHMP6Q96FZ7 201 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 OLFM3Q96PB7 478 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 OPALINQ96PE5 141 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 PPP1R2P1Q96PQ5 205 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 VAT1Q99536 393 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 MCHR1Q99705 422 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 SH3GL1Q99961 368 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 DHRS9Q9BPW9 319 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 MRPL45Q9BRJ2 306 aaKnown RBP1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 UQCC2Q9BRT2 126 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 TTTY12Q9BZ98 90 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 ANKRD19PQ9H560 264 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 NIPAL2Q9H841 368 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 ANKRA2Q9H9E1 313 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 SAR1AQ9NR31 198 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 TUBG2Q9NRH3 451 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 ADA2Q9NZK5 511 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR1A1Q9P1Q5 309 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 CLN8Q9UBY8 286 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 PHF11Q9UIL8 331 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 C3orf18Q9UK00 162 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 NXT1Q9UKK6 140 aaKnown RBP1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 RPL26L1Q9UNX3 145 aaKnown RBP1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 SCML2Q9UQR0 700 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 PLLPQ9Y342 182 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 PPIL1Q9Y3C6 166 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 AMMECR1Q9Y4X0 333 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 TIMM10BQ9Y5J6 103 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 USH1CQ9Y6N9 552 aa1.45□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGHV2-70DA0A0C4DH43 119 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CXorf51AA0A1B0GTR3 108 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 TCRBV9S1A1TA0A576 114 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM159BA6NKW6 160 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 A8MXQ7 604 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 M0QYV0 167 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 BIRC5O15392 142 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 HCRTO43612 131 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SULT1B1O43704 296 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR10H3O60404 316 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ATP5HO75947 161 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 VAPBO95292 243 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 AHSA1O95433 338 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 IFNA5P01569 189 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 MBP02144 154 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 APOEP02649 317 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SNRPAP09012 282 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZDHHC11BP0C7U3 371 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 TBPP20226 339 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 TAC1P20366 129 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 IMPDH1P20839 514 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 GSTM3P21266 225 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 HMOX2P30519 316 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 LCN1P31025 176 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 FOXN2P32314 431 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 HPCAL1P37235 193 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CTRLP40313 264 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 RPL13AP40429 203 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC26A3P40879 764 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 MAP3K8P41279 467 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 MAGEA12P43365 314 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 P2RY1P47900 373 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 MRPL19P49406 292 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ATP1B3P54709 279 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SARNPP82979 210 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 EWSR1Q01844 656 aaKnown RBP eCLIP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 IRF8Q02556 426 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 PPIDQ08752 370 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 IFFO1Q0D2I5 559 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 PDIA2Q13087 525 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 NAB1Q13506 487 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 DGCR6Q14129 220 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 GPR176Q14439 515 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 LAGE3Q14657 143 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 BCL2A1Q16548 175 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 GGTA1PQ4G0N0 100 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 BRMS1LQ5PSV4 323 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 STUMQ69YW2 141 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 TTC23LQ6PF05 361 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGFL1Q6UW32 110 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ASCL4Q6XD76 172 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CLEC20AQ6ZU45 233 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM183BPQ6ZVS7 135 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC35D2Q76EJ3 337 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 DHDDSQ86SQ9 333 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 LINC01551Q86U37 167 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 LRRC6Q86X45 466 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 WDFY1Q8IWB7 410 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 NRMQ8IXM6 262 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC7A5P1Q8MH63 180 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 DEFB106AQ8N104 65 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CLEC4FQ8N1N0 589 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ARHGAP18Q8N392 663 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 C12orf29Q8N999 325 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SUMF2Q8NBJ7 301 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms