RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CDCA4Q9BXL8 241 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 PPA2Q9H2U2 334 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 UBE2J1Q9Y385 318 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 DSCAML1Q8TD84 2053 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 A0A1B0GUS0 222 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 MEX3AA1L020 520 aaKnown RBP20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 POM121CA8CG34 1229 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 GPR137BO60478 399 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 IGHV1-8P0DP01 117 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 MAPK3P27361 379 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 ASCL4Q6XD76 172 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 Q8NFD4 153 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR51T1Q8NGJ9 327 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR4F5Q8NH21 305 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 METTL9Q9H1A3 318 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 PCDHB16Q9NRJ7 776 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 IL36GQ9NZH8 169 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 VPREB3Q9UKI3 123 aa20.14■□□□□ 0.81
RAPGEF1-206ENST00000438647 TRGV10A0A0A0MS01 117 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 TRBV5-7A0A0A0MS05 114 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 SLC33A1O00400 549 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 ZNF780AO75290 641 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 CSTBP04080 98 aaKnown RBP20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR3A4PP47883 348 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 TAF9Q16594 264 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 ORAI1Q96D31 301 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 NR1H4Q96RI1 486 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 ZNF184Q99676 751 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 ZNF747Q9BV97 191 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 GAL3ST2Q9H3Q3 398 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 FOXJ3Q9UPW0 622 aa20.13■□□□□ 0.81
RAPGEF1-206ENST00000438647 CLPXO76031 633 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 NDUFA7O95182 113 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 HTR3BO95264 441 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 TGFBR2P37173 567 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 RAG2P55895 527 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 SLC35A2P78381 396 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 AESQ08117 197 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 AANATQ16613 207 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 IZUMO2Q6UXV1 221 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR10K1Q8NGX5 313 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 MEGF9Q9H1U4 602 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 BEX1Q9HBH7 125 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 C1RLQ9NZP8 487 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 ING4Q9UNL4 249 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 TBL2Q9Y4P3 447 aaKnown RBP20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 MMP24Q9Y5R2 645 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 SESN1Q9Y6P5 492 aa20.12■□□□□ 0.81
RAPGEF1-206ENST00000438647 CDRT1O95170 752 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 ARG1P05089 322 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 OMGP23515 440 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 DOC2BQ14184 412 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 SPHARQ15513 63 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 KRBOX4Q5JUW0 171 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 MS4A15Q8N5U1 240 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR11H6Q8NGC7 330 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 CORO2AQ92828 525 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 FOXRED1Q96CU9 486 aaPredicted RBP20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 DERL3Q96Q80 235 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 TAS2R3Q9NYW6 316 aa20.11■□□□□ 0.81
RAPGEF1-206ENST00000438647 TRAV8-7A0A075B6U6 113 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 A0A1W2PPK0 400 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 ODAMA1E959 279 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 MDKP21741 143 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 GLIPR1P48060 266 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 GPR176Q14439 515 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 ATXN7L3Q14CW9 347 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 LRRC75BQ2VPJ9 315 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 PAN3Q58A45 887 aaKnown RBP20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 NHLRC3Q5JS37 347 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 ZNF626Q68DY1 528 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 SHISA2Q6UWI4 295 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 CDH26Q8IXH8 852 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 OSR2Q8N2R0 312 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 C17orf50Q8WW18 174 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 TAF15Q92804 592 aaKnown RBP eCLIP20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 NKX3-1Q99801 234 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 SSX3Q99909 188 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR6C3Q9NZP0 311 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 ST3GAL6Q9Y274 331 aa20.1■□□□□ 0.81
RAPGEF1-206ENST00000438647 ODF3BA8MYP8 253 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 KCNJ3P48549 501 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 MED22Q15528 200 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 PIGYQ3MUY2 71 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 DHRS7BQ6IAN0 325 aaPredicted RBP20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR52W1Q6IF63 320 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 LINC00596Q86U02 117 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 JAGN1Q8N5M9 183 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 AJUBAQ96IF1 538 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 BARHL1Q9BZE3 327 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 TMEM133Q9H2Q1 129 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 DUSP21Q9H596 190 aa20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 LSM2Q9Y333 95 aaKnown RBP20.09■□□□□ 0.81
RAPGEF1-206ENST00000438647 FBN3Q75N90 2809 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 MAGEA13PA6NCF6 341 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 FAM90A8PA6NJQ4 464 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 H3BUX3 64 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 RGS10O43665 173 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 SERPINA2P20848 420 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 RELBQ01201 579 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms