RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 NTMQ9P121 344 aa15.11■□□□□ 0.01
PTPRF-209ENST00000438120 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.11■□□□□ 0.01
PTPRF-209ENST00000438120 SLC25A40Q8TBP6 338 aa15.11■□□□□ 0.01
PTPRF-209ENST00000438120 CCL28Q9NRJ3 127 aa15.11■□□□□ 0.01
PTPRF-209ENST00000438120 DCAF10Q5QP82 559 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 CLEC18BQ6UXF7 455 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 BCORQ6W2J9 1755 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 SPAG17Q6Q759 2223 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 C5orf67F2Z3F1 127 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 OR2M3Q8NG83 312 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 NEU3Q9UQ49 428 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 CELA2AP08217 269 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 CST2P09228 141 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 ANKRD34CP0C6C1 535 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 A0A1W2PPE3 182 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 F2RL2O00254 374 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 ZNF154Q13106 437 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 PRSS54Q6PEW0 395 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 FAM24BQ8N5W8 94 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 OR4S2Q8NH73 311 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 GLRX2Q9NS18 164 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 TUBAL3A6NHL2 446 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 SLC25A30Q5SVS4 291 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 THYN1Q9P016 225 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 PCOLCE2Q9UKZ9 415 aa15.1■□□□□ 0.01
PTPRF-209ENST00000438120 IGHV4-34P06331 123 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 CLLU1Q5K131 121 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 TOMM20LQ6UXN7 152 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 OR52L2PQ8NGH6 319 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 SSMEM1Q8WWF3 244 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 DPF1Q92782 380 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 MRPS18BQ9Y676 258 aaKnown RBP15.09■□□□□ 0.01
PTPRF-209ENST00000438120 OOEPA6NGQ2 149 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 MS4A18H0YCH9 400 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 FOXS1O43638 330 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 NEURL1O76050 574 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 C21orf58P58505 322 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 LSM6P62312 80 aaKnown RBP15.09■□□□□ 0.01
PTPRF-209ENST00000438120 IL13RA2Q14627 380 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 MS4A18Q3C1V0 323 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 LSMEM1Q8N8F7 131 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 CCL27Q9Y4X3 112 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 TCRBV16S1A1N1A0A5B0 115 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 ZPLD1Q8TCW7 415 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 ZNF385AQ96PM9 386 aaKnown RBP15.09■□□□□ 0.01
PTPRF-209ENST00000438120 TRAV8-7A0A075B6U6 113 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 C21orf140B9A014 251 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 OGG1O15527 345 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 BGLAPP02818 100 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 DUSP15Q9H1R2 295 aaPredicted RBP15.09■□□□□ 0.01
PTPRF-209ENST00000438120 PARD6AQ9NPB6 346 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 CHST1O43916 411 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 LIFP15018 202 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 UBE2L3P68036 154 aaKnown RBP15.09■□□□□ 0.01
PTPRF-209ENST00000438120 CD300CQ08708 224 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 DNAJC13O75165 2243 aa15.09■□□□□ 0.01
PTPRF-209ENST00000438120 IGHV3-21A0A0B4J1V1 117 aa15.08■□□□□ 0.01
PTPRF-209ENST00000438120 FCN1O00602 326 aa15.08■□□□□ 0.01
PTPRF-209ENST00000438120 HTR1DP28221 377 aa15.08■□□□□ 0.01
PTPRF-209ENST00000438120 LGALS7P47929 136 aa15.08■□□□□ 0.01
PTPRF-209ENST00000438120 CLRN3Q8NCR9 226 aa15.08■□□□□ 0.01
PTPRF-209ENST00000438120 HPXP02790 462 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 INHBBP09529 407 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 SLC6A1P30531 599 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 GRAMD2BQ96HH9 432 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 ZNF488Q96MN9 340 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 UFC1Q9Y3C8 167 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 GATCO43716 136 aaKnown RBP15.08■□□□□ 0
PTPRF-209ENST00000438120 IL11P20809 199 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 FAM78BQ5VT40 261 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 SH2D2AQ9NP31 389 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 RNF7Q9UBF6 113 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 ERVS71-1P61550 626 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 REG1BP48304 166 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 AESQ08117 197 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 PRSS3P2Q8NHM4 247 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 ZNF721Q8TF20 911 aa15.08■□□□□ 0
PTPRF-209ENST00000438120 COLQQ9Y215 455 aaPredicted RBP15.08■□□□□ 0
PTPRF-209ENST00000438120 ZP3P21754 424 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 TCL1AP56279 114 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 MDP1Q86V88 176 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 OR10A7Q8NGE5 316 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 CTSDP07339 412 aaPredicted RBP15.07■□□□□ 0
PTPRF-209ENST00000438120 G6PCP35575 357 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 MOGAT2Q3SYC2 334 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 RBM14Q96PK6 669 aaKnown RBP15.07■□□□□ 0
PTPRF-209ENST00000438120 TTTY12Q9BZ98 90 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 TMEM38BQ9NVV0 291 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 ZNF716A6NP11 495 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 CDRT15L2A8MXV6 281 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 NHLH1Q02575 133 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 NHLH2Q02577 135 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 SLC35B3Q9H1N7 401 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 RNF24Q9Y225 148 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 BMPR1BO00238 502 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 CCL21O00585 134 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 SYNGR2O43760 224 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 PRSS23O95084 383 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 SCAND1P57086 179 aa15.07■□□□□ 0
PTPRF-209ENST00000438120 GPA33Q99795 319 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms