RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 TPRKBQ9Y3C4 175 aa12.38□□□□□ -0.43
LIMS3-201ENST00000437679 TRGV10A0A0A0MS01 117 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
LIMS3-201ENST00000437679 GPX5O75715 221 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 HTR3BO95264 441 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 IGHV1-8P0DP01 117 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 MYF6P23409 242 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 OMGP23515 440 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 TGFBR2P37173 567 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 RAG2P55895 527 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 BDH1Q02338 343 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 AESQ08117 197 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 IL13RA2Q14627 380 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 ASCL4Q6XD76 172 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 OR10K1Q8NGX5 313 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 THRSPQ92748 146 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 TAF15Q92804 592 aaKnown RBP eCLIP12.37□□□□□ -0.43
LIMS3-201ENST00000437679 OR14A2Q96R54 314 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 ZNF747Q9BV97 191 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 CDCA4Q9BXL8 241 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 PAK1IP1Q9NWT1 392 aaPredicted RBP12.37□□□□□ -0.43
LIMS3-201ENST00000437679 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
LIMS3-201ENST00000437679 TRBV5-7A0A0A0MS05 114 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 A0A1W2PPK0 400 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 POM121CA8CG34 1229 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 CDRT1O95170 752 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 NDUFA7O95182 113 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 CSTBP04080 98 aaKnown RBP12.36□□□□□ -0.43
LIMS3-201ENST00000437679 ARG1P05089 322 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 CSN2P05814 226 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 FSTP19883 344 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 TAF9Q16594 264 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 KRBOX4Q5JUW0 171 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 IZUMO2Q6UXV1 221 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 OR51T1Q8NGJ9 327 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 C17orf50Q8WW18 174 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 ZNF184Q99676 751 aaPredicted RBP12.36□□□□□ -0.43
LIMS3-201ENST00000437679 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
LIMS3-201ENST00000437679 SSX3Q99909 188 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 MEGF9Q9H1U4 602 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 BEX1Q9HBH7 125 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 PCDHB16Q9NRJ7 776 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 IL36GQ9NZH8 169 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 FOXJ3Q9UPW0 622 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 SESN1Q9Y6P5 492 aa12.36□□□□□ -0.43
LIMS3-201ENST00000437679 TRAV8-7A0A075B6U6 113 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 ODAMA1E959 279 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 CLPXO76031 633 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 MDKP21741 143 aaPredicted RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 MAPK3P27361 379 aaPredicted RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 GLIPR1P48060 266 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 SLC35A2P78381 396 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 DYNC1I2Q13409 638 aaKnown RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 ATXN7L3Q14CW9 347 aaPredicted RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 SPHARQ15513 63 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 MED22Q15528 200 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 LRRC75BQ2VPJ9 315 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 PIGYQ3MUY2 71 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 PAN3Q58A45 887 aaKnown RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 DHRS7BQ6IAN0 325 aaPredicted RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 Q8NFD4 153 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 OR11H6Q8NGC7 330 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 DERL3Q96Q80 235 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 TAS2R3Q9NYW6 316 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 TBL2Q9Y4P3 447 aaKnown RBP12.35□□□□□ -0.43
LIMS3-201ENST00000437679 MMP24Q9Y5R2 645 aa12.35□□□□□ -0.43
LIMS3-201ENST00000437679 FBN3Q75N90 2809 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 H3BUX3 64 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 HSPB6O14558 160 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 MAS1P04201 325 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 SERPINA2P20848 420 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 DOC2BQ14184 412 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 GPR176Q14439 515 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 AANATQ16613 207 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 CDH26Q8IXH8 852 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 OSR2Q8N2R0 312 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 MS4A15Q8N5U1 240 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 CORO2AQ92828 525 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
LIMS3-201ENST00000437679 COQ2Q96H96 371 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 AJUBAQ96IF1 538 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 OR5M11Q96RB7 305 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 DUSP21Q9H596 190 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 OR6C3Q9NZP0 311 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
LIMS3-201ENST00000437679 TRAV24A0A0B4J272 114 aa12.33□□□□□ -0.44
LIMS3-201ENST00000437679 MAGEA13PA6NCF6 341 aa12.33□□□□□ -0.44
LIMS3-201ENST00000437679 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
LIMS3-201ENST00000437679 ODF3BA8MYP8 253 aa12.33□□□□□ -0.44
LIMS3-201ENST00000437679 RGS10O43665 173 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms