RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SPINT1O43278 529 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 OR3A1P47881 315 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 MUC20Q8N307 709 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-204ENST00000436978 HEXA-AS1Q9H8Q6 139 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 TP53BP1Q12888 1972 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-204ENST00000436978 CCL3P10147 92 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 CPN1P15169 458 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 GALR1P47211 349 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 TNXAQ16473 311 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 HSD17B10Q99714 261 aaKnown RBP13.98□□□□□ -0.17
PTPN13-204ENST00000436978 GZMHP20718 246 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 TBC1D26Q86UD7 250 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 PDPNQ86YL7 162 aa13.98□□□□□ -0.17
PTPN13-204ENST00000436978 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-204ENST00000436978 A0A1W2PPQ1 181 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 CCL21O00585 134 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 INHBBP09529 407 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 LRRTM1Q86UE6 522 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 C9orf40Q8IXQ3 194 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 NEU3Q9UQ49 428 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 NPIPB8E9PQR5 432 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 OGG1O15527 345 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 MPZL1O95297 269 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 AVPR2P30518 371 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 MOGAT2Q3SYC2 334 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 CCDC144NLQ6NUI1 221 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 ZBTB34Q8NCN2 500 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 TRAPPC1Q9Y5R8 145 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 A0A1W2PQF6 199 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 WNT1P04628 370 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 CTSDP07339 412 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-204ENST00000436978 ZNF528Q3MIS6 628 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 ZNF737O75373 536 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 ASCL1P50553 236 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 LIAT1Q6ZQX7 453 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 OR5A2Q8NGI9 324 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 R3HDM4Q96D70 268 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 TTTY12Q9BZ98 90 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 TMEM167BQ9NRX6 74 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 COL4A1P02462 1669 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-204ENST00000436978 DOCK4Q8N1I0 1966 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 CD160O95971 181 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 PTHLHP12272 177 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 MOGAT3Q86VF5 341 aa13.97□□□□□ -0.17
PTPN13-204ENST00000436978 ZP3P21754 424 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 TMEM208Q9BTX3 173 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 RAB33BQ9H082 229 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 SEMA7AO75326 666 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 CA11O75493 328 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 IGHV4-34P06331 123 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 FGF11Q92914 225 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 IGHV3-43A0A0B4J1X8 118 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 IGHV3-43DP0DP04 118 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 RPS4Y1P22090 263 aaKnown RBP13.96□□□□□ -0.17
PTPN13-204ENST00000436978 CDC34P49427 236 aaPredicted RBP13.96□□□□□ -0.17
PTPN13-204ENST00000436978 MRPS11P82912 194 aaKnown RBP13.96□□□□□ -0.17
PTPN13-204ENST00000436978 TMEM97Q5BJF2 176 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 STPG1Q5TH74 334 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 ABHD3Q8WU67 409 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 ANKRD20A5PA0PJZ0 165 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 NGFRP08138 427 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 PDCD1Q15116 288 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 ZNF260Q3ZCT1 412 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 RFESDQ8TAC1 157 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 BLNKQ8WV28 456 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 IL24Q13007 206 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 PLPPR2Q96GM1 343 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 WDR13Q9H1Z4 485 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 FRRS1LQ9P0K9 344 aa13.96□□□□□ -0.17
PTPN13-204ENST00000436978 LYZP61626 148 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 TIAL1Q01085 375 aaKnown RBP eCLIP13.96□□□□□ -0.18
PTPN13-204ENST00000436978 NOL4LQ96MY1 436 aaPredicted RBP13.96□□□□□ -0.18
PTPN13-204ENST00000436978 PRNDQ9UKY0 176 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 IGHV1-45A0A0A0MS14 117 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 ZNF716A6NP11 495 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 AKR7A2O43488 359 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 SSX1Q16384 188 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 GGNBP1Q5YKI7 109 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.18
PTPN13-204ENST00000436978 PMELP40967 661 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 FOXB2Q5VYV0 432 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 ANXA10Q9UJ72 324 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 BGLAPP02818 100 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 DMKNQ6E0U4 476 aaPredicted RBP13.95□□□□□ -0.18
PTPN13-204ENST00000436978 WDR73Q6P4I2 378 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 PERPQ96FX8 193 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 PDZD11Q5EBL8 140 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 DOLPP1Q86YN1 238 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 CHST5Q9GZS9 411 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 GPR27Q9NS67 375 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 CHAC2Q8WUX2 184 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 FLRT3Q9NZU0 649 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 PEBP1P30086 187 aaKnown RBP13.95□□□□□ -0.18
PTPN13-204ENST00000436978 OR4A4PQ8NGN8 299 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 IFNL4K9M1U5 179 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 KHDC3LQ587J8 217 aa13.95□□□□□ -0.18
PTPN13-204ENST00000436978 RELL2Q8NC24 303 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms