RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 FAM90A16PA6NEW6 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 ERICH4A6NGS2 130 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A20PA6NIJ5 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A9PA6NNJ1 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A12PA8MX19 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A5PA8MXJ8 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A15PP0C7V4 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A13PP0C7W8 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A14PP0C7W9 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 FAM90A24PP0C7X0 464 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 TMEM11P17152 192 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 ECI1P42126 302 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 MTCP1P56278 107 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 PTGES3Q15185 160 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 UTF1Q5T230 341 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 SLC35E3Q7Z769 313 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 COMMD1Q8N668 190 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 ASB9Q96DX5 294 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 PCDHB16Q9NRJ7 776 aa9.15□□□□□ -0.95
CHRNA1-207ENST00000435083 ODAMA1E959 279 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 IGHV3-7P01780 117 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 ZNF44P15621 663 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 KRBOX4Q5JUW0 171 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 C9orf66Q5T8R8 295 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 FOXRED2Q8IWF2 684 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 DRAM1Q8N682 238 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 TCEANCQ8N8B7 351 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 CCDC54Q8NEL0 328 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 OR5M8Q8NGP6 311 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 OR9G1Q8NH87 305 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 PP6455Q8WZ26 134 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 RFT1Q96AA3 541 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 NSL1Q96IY1 281 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 HRASLS5Q96KN8 279 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 PRRG3Q9BZD7 231 aa9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 AMMECR1Q9Y4X0 333 aaPredicted RBP9.14□□□□□ -0.95
CHRNA1-207ENST00000435083 A0A087X0M5 115 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 LOC107986453A0A1B0GWG9 222 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 A0A1B0GX30 115 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 METTL15A6NJ78 407 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 FGF16O43320 207 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 ATF1P18846 271 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 PRKACBP22694 351 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 BNIP1Q12981 228 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 PDZK1IP1Q13113 114 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 C17orf58Q2M2W7 97 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 DEFB136Q30KP8 78 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 AADACL4Q5VUY2 407 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 NXNL2Q5VZ03 156 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 RDH10Q8IZV5 341 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 STPG2Q8N412 459 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 TMEM163Q8TC26 289 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 DNAJC9Q8WXX5 260 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 LEAP2Q969E1 77 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 ADAT3Q96EY9 351 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 COQ2Q96H96 371 aa9.13□□□□□ -0.95
CHRNA1-207ENST00000435083 IGKV1-9A0A0C4DH69 117 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 A0A1W2PPI3 338 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 A0A1W2PQL4 384 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 AQP12BA6NM10 295 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 LINC01548A6NM66 108 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 J3QR06 171 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 IGHG2P01859 326 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 OCM2P0CE71 109 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 OCMP0CE72 109 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 ATXN7L3Q14CW9 347 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 TEX38Q6PEX7 206 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 LCNL1Q6ZST4 164 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 LHFPL2Q6ZUX7 228 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 AQP12AQ8IXF9 295 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 PRSS35Q8N3Z0 413 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 FGGYQ96C11 551 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 KIRREL1Q96J84 757 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 IL4I1Q96RQ9 567 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 PPIL3Q9H2H8 161 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 DCLRE1BQ9H816 532 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 OR6C3Q9NZP0 311 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 IGKV1-12A0A0C4DH73 117 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 KBTBD11-OT1A0A1B0GTJ5 212 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 DEGS1O15121 323 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 APOL3O95236 402 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 LY86O95711 162 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 IGKV1D-33P01593 117 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 IGKV1-33P01594 117 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 IGKV1D-12P01611 117 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 CSN2P05814 226 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 UBCP0CG48 685 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 ZNF20P17024 532 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 GLP1RP43220 463 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 KIR3DL2P43630 455 aa9.12□□□□□ -0.95
CHRNA1-207ENST00000435083 DAPP51397 102 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms