RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MRPS34P82930 218 aaKnown RBP13.47□□□□□ -0.25
SCARF1-203ENST00000434376 PEG10Q86TG7 708 aaKnown RBP13.47□□□□□ -0.25
SCARF1-203ENST00000434376 TMEM230Q96A57 120 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 B4GALT7Q9UBV7 327 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 FBXO7Q9Y3I1 522 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 TACC2O95359 2948 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 PQLC2LA1A4F0 135 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 DUS4LO95620 317 aaKnown RBP13.47□□□□□ -0.25
SCARF1-203ENST00000434376 PIGPP57054 158 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 ERVS71-1P61550 626 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 ALKBH6Q3KRA9 238 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 DNM1P46Q6ZS02 220 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 LYPD6Q86Y78 171 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 TMEM54Q969K7 222 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 KIRREL1Q96J84 757 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 PFDN5Q99471 154 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 EXPH5Q8NEV8 1989 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 MFNGO00587 321 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 C1QL1O75973 258 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 S100A12P80511 92 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 FOXO1Q12778 655 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 APH1AQ96BI3 265 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 LIME1Q9H400 295 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 SH3BGRL2Q9UJC5 107 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 PUS1Q9Y606 427 aaKnown RBP eCLIP13.46□□□□□ -0.25
SCARF1-203ENST00000434376 URGCP-MRPS24S4R325 110 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 KALRNO60229 2985 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 ARFGEF3Q5TH69 2177 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 SYNGR3O43761 229 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 CA6P23280 308 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 FHITP49789 147 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 AWAT1Q58HT5 328 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 OR10AD1Q8NGE0 317 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 MRPL24Q96A35 216 aaKnown RBP13.46□□□□□ -0.25
SCARF1-203ENST00000434376 OR14J1Q9UGF5 321 aa13.46□□□□□ -0.25
SCARF1-203ENST00000434376 COLCA2A8K830 154 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF732B4DXR9 585 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF44P15621 663 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 EPHA1P21709 976 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 FAM3AP98173 230 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 RAB35Q15286 201 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 TMEM128Q5BJH2 165 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 RNFT1Q5M7Z0 435 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 CPT1CQ8TCG5 803 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.26
SCARF1-203ENST00000434376 A0A1W2PPE2 198 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 SYNGR1O43759 233 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 CELA3BP08861 270 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 THBS4P35443 961 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 SCAND1P57086 179 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF552Q9H707 407 aaPredicted RBP13.45□□□□□ -0.26
SCARF1-203ENST00000434376 UFSP2Q9NUQ7 469 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 CARHSP1Q9Y2V2 147 aaKnown RBP13.45□□□□□ -0.26
SCARF1-203ENST00000434376 NPIPB13A6NJU9 1138 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 NPIPB4C9JG80 1138 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 AGFG2O95081 481 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 GRPP07492 148 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 BCL3P20749 454 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 CAV2P51636 162 aa13.45□□□□□ -0.26
SCARF1-203ENST00000434376 CYCSP99999 105 aaKnown RBP13.45□□□□□ -0.26
SCARF1-203ENST00000434376 INTS12Q96CB8 462 aaKnown RBP13.45□□□□□ -0.26
SCARF1-203ENST00000434376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCARF1-203ENST00000434376 PHF1O43189 567 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 FGF16O43320 207 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 IGHV3-13P01766 116 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 IGHV3-7P01780 117 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 ACP1P24666 158 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 PTGER4P35408 488 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 LTC4SQ16873 150 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 HSD17B11Q8NBQ5 300 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 SLC30A7Q8NEW0 376 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 CPNE4Q96A23 557 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 RBMXL1Q96E39 390 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 CYTL1Q9NRR1 136 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 MMP24Q9Y5R2 645 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 HSD17B6O14756 317 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 YIF1AO95070 293 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 GSTP1P09211 210 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 OR5AC1P0C628 307 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 TRIP6Q15654 476 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 MST1LQ2TV78 715 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 EIF5AL1Q6IS14 154 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 HOGA1Q86XE5 327 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 ASB13Q8WXK3 278 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 PP6455Q8WZ26 134 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 HIST1H2AAQ96QV6 131 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 FAM173AQ9BQD7 235 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 RTBDNQ9BSG5 229 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 ETV2O00321 342 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 SUPT4H1P63272 117 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
SCARF1-203ENST00000434376 PLP2Q04941 152 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 C10orf128Q5T292 105 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms