RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 LOXP28300 417 aaPredicted RBP3.62□□□□□ -1.83
USP54-206ENST00000433394 GALR1P47211 349 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 OR12D2P58182 307 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 CDC20Q12834 499 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 BTN1A1Q13410 526 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 TRMT10CQ7L0Y3 403 aaKnown RBP3.62□□□□□ -1.83
USP54-206ENST00000433394 NEGR1Q7Z3B1 354 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 OR2Z1Q8NG97 314 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 CIRBP-AS1Q8TBR5 109 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 CTRCQ99895 268 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 BEX2Q9BXY8 128 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 SLC38A1Q9H2H9 487 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 FKBP14Q9NWM8 211 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 STMN3Q9NZ72 180 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 ZNF229Q9UJW7 825 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 TFR2Q9UP52 801 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 ACOT9Q9Y305 439 aa3.62□□□□□ -1.83
USP54-206ENST00000433394 RBMX2Q9Y388 322 aaKnown RBP3.62□□□□□ -1.83
USP54-206ENST00000433394 GOLGA6L4A6NEF3 574 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 MGAT4DA6NG13 374 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 ENSAO43768 121 aaKnown RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 NDUFS5O43920 106 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 HTR2BP41595 481 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 ATP5J2P56134 94 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 LINC00315P59091 139 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 TAS2R43P59537 309 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 UBE2IP63279 158 aaKnown RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 STX4Q12846 297 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 GPR176Q14439 515 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 C18orf21Q32NC0 220 aaPredicted RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 STX12Q86Y82 276 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 NELFCDQ8IXH7 590 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 OR4D6Q8NGJ1 314 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 OR51Q1Q8NH59 317 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 PDCD6IPQ8WUM4 868 aaKnown RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 CACNG8Q8WXS5 425 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 PPP1R14BQ96C90 147 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 NEURL3Q96EH8 262 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 PDCD1LG2Q9BQ51 273 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 TIMM29Q9BSF4 260 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 ZNF717Q9BY31 904 aaPredicted RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 MRPL20Q9BYC9 149 aaKnown RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 FRMD8P1Q9BZ68 369 aaPredicted RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 PRRG3Q9BZD7 231 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 NLE1Q9NVX2 485 aaPredicted RBP3.61□□□□□ -1.83
USP54-206ENST00000433394 OPN4Q9UHM6 478 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 PPIL1Q9Y3C6 166 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 WIF1Q9Y5W5 379 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 MYH7P12883 1935 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 CASZ1Q86V15 1759 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 ZNF609O15014 1411 aa3.61□□□□□ -1.83
USP54-206ENST00000433394 MYO10Q9HD67 2058 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 IGLV3-12A0A075B6K2 115 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 GOLGA8IPA6NC78 632 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 ZMPSTE24O75844 475 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 SC5DO75845 299 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 RBBP9O75884 186 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 LIPCP11150 499 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 CCL2P13500 99 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 SPAM1P38567 509 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 VBP1P61758 197 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 B2MP61769 119 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 TSPAN5P62079 268 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 GRB2P62993 217 aaKnown RBP3.6□□□□□ -1.83
USP54-206ENST00000433394 IL5RAQ01344 420 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 DYNC1I2Q13409 638 aaKnown RBP3.6□□□□□ -1.83
USP54-206ENST00000433394 ANGPT1Q15389 498 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 ATP6AP1LQ52LC2 224 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 FAHD1Q6P587 224 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 ORMDL3Q8N138 153 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 LRRC52Q8N7C0 313 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 SLC25A29Q8N8R3 303 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 ZNF565Q8N9K5 539 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 CDC26Q8NHZ8 85 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 CCDC12Q8WUD4 166 aaPredicted RBP3.6□□□□□ -1.83
USP54-206ENST00000433394 ORAOV1Q8WV07 137 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 IFT81Q8WYA0 676 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 GPR82Q96P67 336 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 SELENOSQ9BQE4 189 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 LLPHQ9BRT6 129 aaKnown RBP3.6□□□□□ -1.83
USP54-206ENST00000433394 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 TSGA10Q9BZW7 698 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 PORCNQ9H237 461 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 PRORYQ9H606 182 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 LRRC19Q9H756 370 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 SPACA1Q9HBV2 294 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 TAS2R5Q9NYW4 299 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 DNAJC27Q9NZQ0 273 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 STX18Q9P2W9 335 aaKnown RBP3.6□□□□□ -1.83
USP54-206ENST00000433394 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 LRRC37AA6NMS7 1700 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 KIF13BQ9NQT8 1826 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 MYH13Q9UKX3 1938 aa3.6□□□□□ -1.83
USP54-206ENST00000433394 A0A1B0GUL6 1792 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 DLEC1Q9Y238 1755 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 CCDC88AQ3V6T2 1871 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 IGLV2-18A0A075B6J9 118 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 IGHV6-1A0A0B4J1U7 121 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 CYTH3O43739 400 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms