RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ZNF681Q96N22 645 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SCGB3A2Q96PL1 93 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 C1orf50Q9BV19 199 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 GGACTQ9BVM4 153 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 MS4A6AQ9H2W1 248 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 ENY2Q9NPA8 101 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 FAM206AQ9NX38 181 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 GNPTGQ9UJJ9 305 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 UTP11Q9Y3A2 253 aaKnown RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 CD109Q6YHK3 1445 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 PLEKHH1Q9ULM0 1364 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 PHF3Q92576 2039 aaKnown RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 IGKV1D-8A0A087WSZ0 117 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 A0A087WUJ7 227 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 PRORSD1PA6NEY8 169 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OR5B21A6NL26 309 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 IDSB3KWA1 339 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 C15orf65H3BRN8 121 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ERI3O43414 337 aaKnown RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 PLIN3O60664 434 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SLC16A7O60669 478 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ZNF780AO75290 641 aaPredicted RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 CNMDO75829 334 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SLC25A27O95847 323 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 HAND1O96004 215 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 IGF2P01344 180 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 IFNA1P01562 189 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 C1GALT1C1LP0DN25 315 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 FOLR1P15328 257 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ZNF250P15622 560 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ZNF25P17030 456 aaPredicted RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 RAB3AP20336 220 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 F2RP25116 425 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 CD200P41217 278 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 GALR1P47211 349 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SULT1A1P50225 295 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SULT1A2P50226 295 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 LHX2P50458 406 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 UBE2E1P51965 193 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 DLX6P56179 175 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ARG2P78540 354 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 PSG4Q00888 419 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 FAM53BQ14153 422 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OXA1LQ15070 435 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 TSNQ15631 228 aaKnown RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 GRK1Q15835 563 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 LIN52Q52LA3 116 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ACSBG2Q5FVE4 666 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 FAM27D1Q5T7N8 215 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 HENMT1Q5T8I9 393 aaKnown RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 SAMD13Q5VXD3 122 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 TMEM215Q68D42 235 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 HBMQ6B0K9 141 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ELP2Q6IA86 826 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OR52E8Q6IFG1 317 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 FAM71E1Q6IPT2 247 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SCIMPQ6UWF3 145 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 GRINAQ7Z429 371 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 COMMD7Q86VX2 200 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 C10orf107Q8IVU9 208 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ZNF567Q8N184 647 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SLC35F6Q8N357 371 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 LRRC25Q8N386 305 aaPredicted RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 EID2Q8N6I1 236 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OR8G5Q8NG78 346 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OR9Q1Q8NGQ5 310 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 EEF1AKMT3Q96AZ1 226 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 CLDN23Q96B33 292 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 ZHX1-C8orf76Q96EF9 292 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 UBE2E2Q96LR5 201 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 HBEGFQ99075 208 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 APOL4Q9BPW4 351 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 C20orf144Q9BQM9 153 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 AGMATQ9BSE5 352 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OR11A1Q9GZK7 315 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 CHST5Q9GZS9 411 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 SIAEQ9HAT2 523 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 OR12D3Q9UGF7 316 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 NUFIP1Q9UHK0 495 aaKnown RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 LGALS13Q9UHV8 139 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 COPS3Q9UNS2 423 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 PSG8Q9UQ74 426 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 TP53TG1Q9Y2A0 90 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 UGT2A1Q9Y4X1 527 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 KLF12Q9Y4X4 402 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 KIF26AQ9ULI4 1882 aaPredicted RBP1.91□□□□□ -2.1
CLK1-204ENST00000432425 LRP4O75096 1905 aa1.91□□□□□ -2.1
CLK1-204ENST00000432425 DENND4AQ7Z401 1863 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CHD2O14647 1828 aaKnown RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 XIRP1Q702N8 1843 aaKnown RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 A0A0G2JMP0 313 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 PVALEFA0A1B0GWK0 134 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 IGSF23A1L1A6 192 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 FAM92AA1XBS5 289 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 FAM159BA6NKW6 160 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 PPP5D1E7EU14 171 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 H7C2Y5 167 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 MANBAO00462 879 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 NME4O00746 187 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 PDE6DO43924 150 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms